[1]. Integrated AI Framework for Room-Temperature Atom Manipulation in Scanning Probe Microscopy
Nano Letters / - （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Junya Okuyama, Zhuo Diao, Hayato Yamashita, Masayuki Abe [DOI]
[2]. STM study of unusual link structure formation on rutile TiO2(110)-(1×2) surface induced by water adsorption and low-temperature annealing
Physica Scripta / - （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Fengxuan Li, Daiki Katsube, Zhuo Diao, Hayato Yamashita, Masayuki Abe [DOI]
[3]. A metaverse laboratory setup for interactive atom visualization and manipulation with scanning probe microscopy
Scientific Reports 15/1 - （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Hayato Yamashita, Masayuki Abe [URL] [DOI]
[4]. Anchor point based image registration for absolute scale topographic structure detection in microscopy.
Scientific reports 15/1 13486-13486 （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Zijie Meng, Fengxuan Li, Linfeng Hou, Hayato Yamashita, Tetsuya Tohei, Masayuki Abe, Akira Sakai [DOI]
[5]. Structural insights into CDF1 accumulation on the CONSTANS promoter via a plant-specific DNA-binding domain.
Nature plants 11/4 836-848 （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Hirotake Furihata, Zhangliang Zhu, Kaisei Nishida, Yasuhito Sakuraba, Akihiro Tsuji, Hayato Yamashita, Shohei Nosaki, Ryo Tachibana, Ayumi Yamagami, Yoshiki Ikeda, Masayuki Abe, Tatsuya Sawasaki, Takeshi Nakano, Shuichi Yanagisawa, Masaru Tanokura, Takuya [DOI]
[6]. Leveraging large language model and social network service for automation in scanning probe microscopy
Measurement Science and Technology 36/4 047001-047001 （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Hayato Yamashita, Masayuki Abe [URL] [DOI]
[7]. Membrane tubulation induced by a bacterial glycolipid
Scientific Reports 15/1 - （2025年） [査読] 有
[責任著者・共著者の別]
[著者] Kaoru Nomura, Akihiro Tsuji, Hayato Yamashita, Masayuki Abe, Kohki Fujikawa, Shoko Mori, Tsukiho Osawa, Hiromi Toyonaga, Tomohiro Osugi, Kazuma Yasuhara, Kenichi Morigaki, Ken-ichi Nishiyama, Keiko Shimamoto [URL] [DOI]
[8]. AI‐Equipped Scanning Probe Microscopy for Autonomous Site‐Specific Atomic‐Level Characterization at Room Temperature
Small Methods 9/1 - （2024年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Keiichi Ueda, Linfeng Hou, Fengxuan Li, Hayato Yamashita, Masayuki Abe [URL] [DOI]
[9]. Existence probabilities of single Si atoms diffusing in Si(111)-(7 × 7) half-unit cells at room temperature
Applied Physics Letters 125/4 - （2024年） [査読] 有
[責任著者・共著者の別]
[著者] K. Ueda, Z. Diao, L. Hou, H. Yamashita, M. Abe [DOI]
[10]. Feature correlation method for image reconstruction evaluation in under-sampled scanning probe microscopy
Japanese Journal of Applied Physics / - （2024年） [査読] 有
[責任著者・共著者の別]
[著者] Keiichi Ueda, Zhuo Diao, Linfeng Hou, Hayato Yamashita, Masayuki Abe [DOI]
[11]. Time-reduction imaging method for scanning-probe microscopy using a compressed sensing algorithm based on sequential reconstruction method
Journal of the Ceramic Society of Japan 131/10 645-650 （2023年） [査読] 有
[責任著者・共著者の別]
[著者] Keiichi Ueda, Diao Zhuo, Linfeng Hou, Hayato Yamashita, Masayuki Abe [URL] [DOI]
[12]. Automatic drift compensation for nanoscale imaging using feature point matching
Applied Physics Letters 122/12 - （2023年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Keiichi Ueda, Linfeng Hou, Hayato Yamashita, Oscar Custance, Masayuki Abe [URL] [DOI]
[13]. Reduction of noise induced by power supply lines using phase-locked loop
Review of Scientific Instruments 93/11 113704-113704 （2022年） [査読] 有
[責任著者・共著者の別]
[著者] M. Abe, H. Yamashita, S. Jinno, O. Custance, H. Toki [URL] [DOI]
[14]. Dimerization processes for light-regulated transcription factor Photozipper visualized by high-speed atomic force microscopy
Scientific reports 12/1 12903- （2022年） [査読] 有
[責任著者・共著者の別]
[著者] Akihiro Tsuji, Hayato Yamashita, Osamu Hisatomi, Masayuki Abe [DOI]
[15]. Photoactivatable Materials for Versatile Single-Cell Patterning Based on the Photocaging of Cell-Anchoring Moieties through Lipid Self-Assembly.
Journal of the American Chemical Society / - （2022年） [査読] 有
[責任著者・共著者の別]
[著者] Shinya Yamahira, Ryuji Misawa, Takahiro Kosaka, Mondong Tan, Shin Izuta, Hayato Yamashita, Yuji Heike, Akimitsu Okamoto, Teruyuki Nagamune, Satoshi Yamaguchi [DOI]
[16]. Antibacterial Activity of Membrane-Permeabilizing Bactericidal Cyclodextrin Derivatives
ACS Omega 6/47 31831-31842 （2021年） [査読] 有
[責任著者・共著者の別]
[著者] Hatsuo Yamamura, Tatsuya Hagiwara, Yuma Hayashi, Kayo Osawa, Hisato Kato, Takashi Katsu, Kazufumi Masuda, Ayumi Sumino, Hayato Yamashita, Ryo Jinno, Masayuki Abe, Atsushi Miyagawa [URL] [DOI]
[17]. Local states of chromatin compaction at transcription start sites control transcription levels.
Nucleic acids research 49/14 8007-8023 （2021年） [査読] 有
[責任著者・共著者の別]
[著者] Satoru Ishihara, Yohei Sasagawa, Takeru Kameda, Hayato Yamashita, Mana Umeda, Naoe Kotomura, Masayuki Abe, Yohei Shimono, Itoshi Nikaido [DOI]
[18]. In situ measurements of intracellular thermal conductivity using heater-thermometer hybrid diamond nanosensors
Science Advances 7/3 - （2021年） [査読] 有
[責任著者・共著者の別]
[著者] Shingo Sotoma, Chongxia Zhong, James Chen Yong Kah, Hayato Yamashita, Taras Plakhotnik, Yoshie Harada, Madoka Suzuki [URL] [DOI]
[19]. A helical amplification system composed of artificial nucleic acids
Chemical Science 12/5 1656-1660 （2021年） [査読] 有
[責任著者・共著者の別]
[著者] Hiromu Kashida, Keiji Nishikawa, Wenjing Shi, Toshiki Miyagawa, Hayato Yamashita, Masayuki Abe, Hiroyuki Asanuma [URL] [DOI]
[20]. Automated extraction of the short-range part of the interaction in non-contact atomic force microscopy
Applied Physics Letters 117/3 - （2020年） [査読] 有
[責任著者・共著者の別]
[著者] Zhuo Diao, Daiki Katsube, Hayato Yamashita, Yoshiaki Sugimoto, Oscar Custance, Masayuki Abe [URL] [DOI]
[21]. Flexure Structural Scanner of Tip Scan Type for High-speed Scanning Tunneling Microscopy
e-Journal of Surface Science and Nanotechnology 18/ 146-151 （2020年） [査読] 有
[責任著者・共著者の別]
[著者] Hayato Yamashita, Nobuhiro Handa, Yuma Higashiura, Masayuki Abe [URL] [DOI]
[22]. Affinity of rhodopsin to raft enables the aligned oligomer formation from dimers: Coarse-grained molecular dynamics simulation of disk membranes
PLoS ONE 15/2 - （2020年） [査読] 有
[責任著者・共著者の別]
[著者] Yukito Kaneshige, Fumio Hayashi, Kenichi Morigaki, Yasushi Tanimoto, Hayato Yamashita, Masashi Fujii, Akinori Awazu [DOI]
[23]. Enhancement of cell differentiation on a surface potential-controlled nitrogen-doped TiO2 surface
Journal of the Ceramic Society of Japan 127/9 636-641 （2019年） [査読] 有
[責任著者・共著者の別]
[著者] Masami HASHIMOTO, Satoshi KITAOKA, Maiko FURUYA, Hiroyasu KANETAKA, Kazuhiko HOSHIKAYA, Hayato YAMASHITA, Masayuki ABE [URL] [DOI]
[24]. Surface structure switching between (1 × 1) and (1 × 2) of rutile TiO2(110) with scanning tunneling microscopy and low energy electron diffraction
Japanese Journal of Applied Physics 58/SI - （2019年） [査読] 有
[責任著者・共著者の別]
[著者] Shoki Ojima, Daiki Katsube, Hayato Yamashita, Yuji Miyato, Satoshi Abo, Masayuki Abe [URL] [DOI]
[25]. Measurement of the Lateral Charge Distribution in Silicon Generated by High-Energy Ion Incidence
Proceedings of the International Conference on Ion Implantation Technology 2018-September/IIT 156-159 （2018年） [査読] 有
[責任著者・共著者の別]
[著者] Satoshi Abo, Kenichi Tani, Fujio Wakaya, Shinobu Onoda, Yuji Miyato, Hayato Yamashita, Masayuki Abe [URL] [DOI]
[26]. Control of surface potential and hydroxyapatite formation on TiO2 scales containing nitrogen-related defects
Acta Materialia 155/ 379-385 （2018年） [査読] 有
[責任著者・共著者の別]
[著者] Masami Hashimoto, Takafumi Ogawa, Satoshi Kitaoka, Shunsuke Muto, Maiko Furuya, Hiroyasu Kanetaka, Masayuki Abe, Hayato Yamashita [DOI]
[27]. Bifacial Nucleobases for Hexaplex Formation in Aqueous Solution.
Journal of the American Chemical Society 140/27 8456-8462 （2018年） [査読] 有
[責任著者・共著者の別]
[著者] Kashida H, Hattori Y, Tazoe K, Inoue T, Nishikawa K, Ishii K, Uchiyama S, Yamashita H, Abe M, Kamiya Y, Asanuma H [DOI]
[28]. MC3T3-E1 Cellular Response and Protein Detection on Surface Potential-Controlled TiO2 Scale in Serum-Containing Medium
Key Engineering Materials 782/ 218-223 （2018年） [査読] 有
[責任著者・共著者の別]
[著者] M. Hashimoto, T. Ogawa, S. Kitaoka, S. Muto, M. Furuya, H. Kanetaka, M. Abe, H. Yamashita
[29]. Combined pulsed laser deposition and non-contact atomic force microscopy system for studies of insulator metal oxide thin films
Beilstein Journal of Nanotechnology 9/1 686-692 （2018年） [査読] 有
[責任著者・共著者の別]
[著者] Daiki Katsube, Hayato Yamashita, Satoshi Abo, Masayuki Abe [DOI]
[30]. Characterization of X-ray charge neutralizer using carbon-nanotube field emitter
Japanese Journal of Applied Physics 55/6S1 06GF10-06GF10 （2016年） [査読] 有
[責任著者・共著者の別]
[著者] Shuhei Okawaki, Satoshi Abo, Fujio Wakaya, Hayato Yamashita, Masayuki Abe, Mikio Takai [URL] [DOI]
[31]. A Preparation Method for Atomically Clean Sapphire Surfaces and High Resolution Topographic Method for Their Imaging by Non-Contact Atomic Force Microscopy
MATERIALS TRANSACTIONS 56/8 1310-1313 （2015年） [査読] 有
[責任著者・共著者の別]
[著者] Daiki Katsube, Yutaro Takase, Hayato Yamashita, Satoshi Abo, Fujio Wakaya, Masayuki Abe [URL] [DOI]
[32]. Role of trimer–trimer interaction of bacteriorhodopsin studied by optical spectroscopy and high-speed atomic force microscopy
Journal of Structural Biology 184/1 2-11 （2013年） [査読] 有
[責任著者・共著者の別]
[著者] Hayato Yamashita, Keiichi Inoue, Mikihiro Shibata, Takayuki Uchihashi, Jun Sasaki, Hideki Kandori, Toshio Ando [DOI]
[33]. Single-Molecule Imaging on Living Bacterial Cell Surface by High-Speed AFM
Journal of Molecular Biology 422/2 300-309 （2012年） [査読] 有
[責任著者・共著者の別]
[著者] Hayato Yamashita, Azuma Taoka, Takayuki Uchihashi, Tomoya Asano, Toshio Ando, Yoshihiro Fukumori [DOI]
[34]. Structural Changes in Bacteriorhodopsin in Response to Alternate Illumination Observed by High‐Speed Atomic Force Microscopy
Angewandte Chemie International Edition 50/19 4410-4413 （2011年） [査読] 有
[責任著者・共著者の別]
[著者] Mikihiro Shibata, Takayuki Uchihashi, Hayato Yamashita, Hideki Kandori, Toshio Ando [URL] [DOI]
[35]. High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin
Nature Nanotechnology 5/3 208-212 （2010年） [査読] 有
[責任著者・共著者の別]
[著者] Mikihiro Shibata, Hayato Yamashita, Takayuki Uchihashi, Hideki Kandori, Toshio Ando [URL] [DOI]
[36]. High-Speed Atomic Force Microscopy Techniques for Observing Dynamic Biomolecular Processes
Methods in Enzymology / 541-564 （2010年） [査読] 有
[責任著者・共著者の別]
[著者] Daisuke Yamamoto, Takayuki Uchihashi, Noriyuki Kodera, Hayato Yamashita, Shingo Nishikori, Teru Ogura, Mikihiro Shibata, Toshio Ando [DOI]
[37]. Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy
Journal of Structural Biology 167/2 153-158 （2009年） [査読] 有
[責任著者・共著者の別]
[著者] Hayato Yamashita, Kislon Voïtchovsky, Takayuki Uchihashi, Sonia Antoranz Contera, John F. Ryan, Toshio Ando [DOI]
[38]. High-speed AFM and nano-visualization of biomolecular processes
Pflügers Archiv - European Journal of Physiology 456/1 211-225 （2007年） [査読] 有
[責任著者・共著者の別]
[著者] Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Daisuke Yamamoto, Atsushi Miyagi, Masaaki Taniguchi, Hayato Yamashita [URL] [DOI]
[39]. High-speed atomic force microscopy for observing dynamic biomolecular processes
Journal of Molecular Recognition 20/6 448-458 （2007年） [査読] 有
[責任著者・共著者の別]
[著者] Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Daisuke Yamamoto, Masaaki Taniguchi, Atsushi Miyagi, Hayato Yamashita [URL] [DOI]
[40]. Tip-sample distance control using photothermal actuation of a small cantilever for high-speed atomic force microscopy
Review of Scientific Instruments 78/8 - （2007年） [査読] 有
[責任著者・共著者の別]
[著者] Hayato Yamashita, Noriyuki Kodera, Atsushi Miyagi, Takayuki Uchihashi, Daisuke Yamamoto, Toshio Ando [URL] [DOI]
[41]. Fast phase imaging in liquids using a rapid scan atomic force microscope
Applied Physics Letters 89/21 - （2006年） [査読] 有
[責任著者・共著者の別]
[著者] Takayuki Uchihashi, Toshio Ando, Hayato Yamashita [URL] [DOI]
[42]. Feed-Forward Compensation for High-Speed Atomic Force Microscopy Imaging of Biomolecules
Japanese Journal of Applied Physics 45/3S 1904-1904 （2006年） [査読] 有
[責任著者・共著者の別]
[著者] Takayuki Uchihashi, Noriyuki Kodera, Hisanori Itoh, Hayato Yamashita, Toshio Ando [URL] [DOI]
[43]. High-Speed Atomic Force Microscopy for Studying the Dynamic Behavior of Protein Molecules at Work
Japanese Journal of Applied Physics 45/3S 1897-1897 （2006年） [査読] 有
[責任著者・共著者の別]
[著者] Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Atsushi Miyagi, Ryo Nakakita, Hayato Yamashita, Mitsuru Sakashita [URL] [DOI]
[44]. High-speed atomic force microscopy for capturing dynamic behavior of protein molecules at work
e-Journal of Surface Science and Nanotechnology 3/ 384-392 （2005年） [査読] 有
[責任著者・共著者の別]
[著者] Toshio Ando, Noriyuki Kodera, Takayuki Uchihashi, Atsushi Miyagi, Ryo Nakakita, Hayato Yamashita, Keiko Matada [URL] [DOI]
[45]. Active damping of the scanner for high-speed atomic force microscopy
Review of Scientific Instruments 76/5 - （2005年） [査読] 有
[責任著者・共著者の別]
[著者] Noriyuki Kodera, Hayato Yamashita, Toshio Ando [URL] [DOI] |