静岡大学：教員データベース

Researcher DataBase - Personal Information : KANESAKI Yu

Papers, etc.

【Papers, etc.】
[1]. Complete genome sequence of Paraburkholderia sp. strain 22B1P capable of utilizing 3-chlorobenzoate as a carbon source. Microbiology Resource Announcements 13/4 - e0123523 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] author [Author] Moriuchi R., Sano R., Fujii S., Suzuki Y., Makita M., Kawashima Y., Shirakawa T., Shindo R., Shinkai T., Miura K., Hirose M., Nakajima M., Kurokawa A., Chetia R., Hirokawa C., Suzuki T., Ito Y., Murano H., Dohra H., Ogawa N., Kanesaki Y. [URL] [DOI] [2]. A high-temperature sensitivity of Synechococcus elongatus PCC 7942 due to a tRNA-Leu mutation. The Journal of General and Applied Microbiology 69/3 164-174 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Hasegawa H., Kanesaki Y., Watanabe S., and Tanaka K. [DOI] [3]. Implication of amino acid metabolism and cell surface integrity for the thermotolerance mechanism in the thermally adapted acetic acid bacterium Acetobacter pasteurianus TH-3. Journal of Bacteriology / - (2023) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Matsumoto N., Matsutani M., Tanimoto Y., Nakanishi R., Tanaka S., Kanesaki Y., Theeragool G., Kataoka N., Yakushi T. and Matsushita K. [DOI] [4]. yaaJ, the tRNA-Specific Adenosine Deaminase, Is Dispensable in Bacillus subtilis. Genes 14/8 - 1515 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Soma A., Kubota A., Tomoe D., Ikeuchi Y., Kawamura F., Arimoto H., Shiwa Y., Kanesaki Y., Nanamiya H., Yoshikawa H., Suzuki T., and Sekine Y. [DOI] [5]. Class II LitR serves as an effector of “short” LOV-type blue-light photoreceptor in Pseudomonas mendocina. Scientific Reports 12/1 - 21765 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Maruyama T., Sumi S., Kobayashi M., Ebuchi T., Kanesaki Y., Yoshikawa H., Ueda K., Takano H. [DOI] [6]. Possible involvement of extracellular polymeric substrates of Antarctic cyanobacterium Nostoc sp. strain SO-36 in adaptation to harsh environments. Journal of Plant Research 135/6 771-784 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] author [Author] Effendi DB, Sakamoto T, Ohtani S, Awai K, Kanesaki Y. [DOI] [7]. Mutations in degP and spoT Genes Mediate Response to Fermentation Stress in Thermally Adapted Strains of Acetic Acid Bacterium Komagataeibacter medellinensis NBRC 3288. Frontiers in Microbiology 13/ - 802010 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kataoka N, Matsutani M, Matsumoto N, Oda M, Mizumachi Y, Ito K, Tanaka S, Kanesaki Y, Yakushi T, Matsushita K. [DOI] [8]. Evolutionary Adaptation by Repetitive Long-Term Cultivation with Gradual Increase in Temperature for Acquiring Multi-Stress Tolerance and High Ethanol Productivity in Kluyveromyces marxianus DMKU 3-1042 Microorganisms 10/4 - 798 (2022) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Pattanakittivorakul S., Tsuzuno T., Kosaka T., Murata M., Kanesaki Y., Yoshikawa H., Limtong S. and Yamada M. [DOI] [9]. Draft Genome Sequence of Lactiplantibacillus plantarum NMZ-1139, Isolated from Whisky Mash. Microbiology Resource Announcements 10/49 - e0100821 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Takagi H, Moriuchi R, Kanesaki Y, Katsuyama S, Suzuki M, Mochizuki R, Yokozawa K, Iwahara K, Dohra H. [DOI] [10]. RNA-seq analysis identified glucose-responsive genes and YqfO as a global regulator in Bacillus subtilis. BMC Research Notes 14/1 - 450 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kanesaki Y, Ogura M [DOI] [11]. Physiological and genomic analysis of newly-isolated polysaccharide synthesizing cyanobacterium Chroococcus sp. FPU101 and chemical analysis of the exopolysaccharide. The Journal of General and Applied Microbiology 67/ 207-213 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Yoshikawa S, Kanesaki Y, Uemura A, Yamada K, Okajima M, Kaneko T, Ohki K. [DOI] [12]. Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade. DNA Research 28/6 - dsab024 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Hirose Y, Ohtsubo Y, Misawa N, Yonekawa C, Nagao N, Shimura Y, Fujisawa T, Kanesaki Y, Katoh H, Katayama M, Yamaguchi H, Yoshikawa H, Ikeuchi M, Eki T, Nakamura Y, Kawachi M. [DOI] [13]. Transcriptome differences between Cupriavidus necator NH9 grown with 3-chlorobenzoate and that grown with benzoate. Bioscience Biotechnology and Biochemistry 85/6 1546-1561 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Moriuchi R, Dohra H, Kanesaki Y, Ogawa N [DOI] [14]. Identification of Transcription Factors and the Regulatory Genes Involved in Triacylglycerol Accumulation in the Unicellular Red Alga Cyanidioschyzon merolae Plants 10/5 - 971 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Takahashi S, Okubo R, Kanesaki Y, Zhou B, Takaya K, Watanabe S, Tanaka K, Imamura S [DOI] [15]. Reacquisition of light-harvesting genes in a marine cyanobacterium confers a broader solar niche. Current Biology 31/7 1539-1546 (2021) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Ulrich NJ, Uchida H, Kanesaki Y, Hirose E, Murakami A, Miller SR. [DOI] [16]. 16S rRNA Gene Amplicon Sequencing of Gut Microbiota in Three Species of Deep-Sea Fish in Suruga Bay, Japan Microbiology Resource Announcements 10/1 -- e01260-20 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Iwatsuki T, Kanazawa T, Ogasawara T, Hosotani K, Tsuchiya K, Watanabe S, Suzuki T, Moriuchi R, Kanesaki Y, Dohra H [DOI] [17]. The Rubisco small subunits in the green algal genus Chloromonas provide insights into evolutionary loss of the eukaryotic carbon-concentrating organelle, the pyrenoid. BMC Ecology and Evolution 21/ - 11 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Matsuzaki R., Suzuki S., Yamaguchi H., Kawachi M., Kanesaki Y., Yoshikawa H., Mori T. and Nozaki H. [DOI] [18]. Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters. Harmful Algae 101/ 101942- (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Shimura Y, Fujisawa T, Hirose Y, Misawa N, Kanesaki Y, Nakamura Y, Kawachi M. [DOI] [19]. Transcriptome profile of carbon catabolite repression in an efficient l-(+)-lactic acid-producing bacterium Enterococcus mundtii QU25 grown in media with combinations of cellobiose, xylose, and glucose. PLoS One 15/11 e0242070- (2020) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Shiwa Y, Fujiwara H, Numaguchi M, Abdel-Rahman MA, Nabeta K, Kanesaki Y, Tashiro Y, Zendo T, Tanaka N, Fujita N, Yoshikawa H, Sonomoto K, Shimizu-Kadota M. [DOI] [20]. Changes in the transcriptome, ploidy, and optimal light intensity of a cryptomonad upon integration into a kleptoplastic dinoflagellate. The ISME Journal 14/10 2407-2423 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Onuma R, Hirooka S, Kanesaki Y, Fujiwara T, Yoshikawa H, Miyagishima SY. [DOI] [21]. The CRP-family Transcriptional Regulator DevH Regulates Expression of Heterocyst-Specific Genes at the Later Stage of Differentiation in the Cyanobacterium Anabaena sp. Strain PCC 7120. Molecular Microbiology 114/ 4 553- 562 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kurio Y, Koike Y, Kanesaki Y, Watanabe S, Ehira S [DOI] [22]. Bacillus subtilis Nucleoid-Associated Protein YlxR Is Involved in Bimodal Expression of the Fructoselysine Utilization Operon (frlBONMD-yurJ) Promoter Frontiers in Microbiolgy 11/ 2024- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Ogura M, Shindo K, Kanesaki Y [DOI] [23]. Fpr1, a Primary Target of Rapamycin, Functions as a Transcription Factor for Ribosomal Protein Genes Cooperatively With Hmo1 in Saccharomyces Cerevisiae PLoS Genetics 16/6 e1008865- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kasahara K, Nakayama R, Shiwa Y, Kanesaki Y, Ishige T, Yoshikawa H, Kokubo T. [DOI] [24]. 78/4 350-353 (2020) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] 谷口智之, 兼崎友, 金子慎一郎, 大城香 [25]. Acclimation process of the chlorophyll d-bearing cyanobacterium Acaryochloris marina to orange light environment revealed by transcriptomic analysis and electron microscopic observation. The Journal of General and Applied Microbiology 66/ 2 106- 115 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] author [Author] Kashimoto T, Miyake K, Sato M, Maeda K, Matsumoto C, Ikeuchi M, Toyooka K, Watanabe S, Kanesaki Y, Narikawa R. [DOI] [26]. Characteristics of physiology of and genomic mutations in aggregation-enhanced mutants of Methanothermobacter sp. CaT2. Bioscience Biotechnology and Biochemistry 84/ 5 1047- 1055 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Sumikawa K, Kosaka T, Udo K, Kanesaki Y, Yoshikawa H, Yamada M. [DOI] [27]. H-NS Family Proteins Drastically Change Their Targets in Response to the Horizontal Transfer of the Catabolic Plasmid pCAR1. Frontiers in Microbiology 11/ 1019- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Nakamura T., Suzuki-Minakuchi C., Kawano H., Kanesaki Y., Kawasaki S., Okada K., Nojiri H. [DOI] [28]. RNase E-dependent Degradation of tnaA mRNA Encoding Tryptophanase Is Prerequisite for the Induction of Acid Resistance in Escherichia Coli. Scientific Reports 10/1 7128- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kanda T., Abiko G., Kanesaki Y., Yoshikawa H., Iwai N., Wachi M. [DOI] [29]. Evolutionary Changes in DnaA-Dependent Chromosomal Replication in Cyanobacteria. Frontiers in Microbiology 11/ 786- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Ohbayashi R, Hirooka S, Onuma R, Kanesaki Y, Hirose Y, Kobayashi Y, Fujiwara T, Furusawa C, Miyagishima SY. [DOI] [30]. Novel (p)ppGpp0 suppressor mutations reveal an unexpected link between methionine catabolism and GTP synthesis in Bacillus subtilis. Molecular Microbiology / - (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Osaka N., Kanesaki Y., Watanabe M., Watanabe S., Chibazakura T., Takada H., Yoshikawa H., Asai K. [DOI] [31]. Genes regulated by branched-chain polyamine in the hyperthermophilic archaeon Thermococcus kodakarensis. Amino Acids 52/2 287-299 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Fukuda W, Yamori Y, Hamakawa M, Osaki M, Fukuda M, Hidese R, Kanesaki Y, Okamoto-Kainuma A, Kato S, Fujiwara S. [DOI] [32]. Responses of unicellular predators to cope with the phototoxicity of photosynthetic prey. Nature Communications 10/1 5606- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Uzuka A, Kobayashi Y, Onuma R, Hirooka S, Kanesaki Y, Yoshikawa H, Fujiwara T, Miyagishima SY. [DOI] [33]. A pseudo-fructophilic Leuconostoc citreum strain F192-5 isolated from the peel of satsuma mandarin. Applied and Environmental Microbiology 85/20 e01077-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Maeno S, Tanizawa Y, Kajikawa A, Kanesaki Y, Kubota E, Arita M, Dicks L, Endo A. [DOI] [34]. Interplay and Targetome of the Two Conserved Cyanobacterial sRNAs Yfr1 and Yfr2 in Prochlorococcus MED4. Scientific Reports 9/1 14331- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Lambrecht SJ, Kanesaki Y, Fuss J, Huettel B, Reinhardt R, Steglich C [DOI] [35]. Ubr1p-Cup9p-Ptr2p pathway involves in the sensitivity to readthrough compounds negamycin derivatives in budding yeast. Bioscience Biotechnology and Biochemistry 83/10 1889-1892 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Hamada K, Naito A, Hamaguchi Y, Kanesaki Y, Kasahara K, Taguchi A, Omura N, Hayashi Y, Usui T. [DOI] [36]. Free flavins accelerate release of ferrous iron from iron storage proteins by both free flavin-dependent and -independent ferric reductases in Escherichia coli. The Journal of General and Applied Microbiology 65/6 308-315 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Satoh J, Kimata S, Nakamoto S, Ishii T, Tanaka E, Yumoto S, Takeda K, Yoshimura E, Kanesaki Y, Ishige T, Tanaka K, Abe A, Kawasaki S, Niimura Y. [DOI] [37]. Sulfur-Containing Carotenoids from A Marine Coral Symbiont Erythrobacter flavus Strain KJ5. Marine Drugs 17/6 E349- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Setiyono E, Heriyanto, Pringgenies D, Shioi Y, Kanesaki Y, Awai K, Brotosudarmo THP [DOI] [38]. Draft Genome Sequence of Zygosaccharomyces mellis CA-7, Isolated from Honey. Microbiology Resource Announcements 8/ 26 e00449-19- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Shiwa Y, Kanesaki Y, Ishige T, Mura K, Hori T, Tamura T. [DOI] [39]. Capacity for survival in global warming: Adaptation of mesophiles to the temperature upper limit. PLoS One 14/5 e0215614- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Kosaka T., Nakajima Y., Ishii A., Yamashita M., Yoshida S., Murata M., Kato K., Shiromaru Y., Kato S., Kanesaki Y., Yoshikawa H., Matsutani M., Thanonkeo P., Yamada M. [DOI] [40]. Complete Genome Sequence of Enterococcus faecium QU50, a Thermophilic Lactic Acid Bacterium Capable of Metabolizing Xylose. Microbiology Resource Announcements 8/21 e00413-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Abe K, Kanesaki Y, Abdel-Rahman MA, Watanabe S, Zendo T, Chibazakura T, Shimizu-Kadota M, Sonomoto K, Yoshikawa H [DOI] [41]. Integration of a Galdieria plasma membrane sugar transporter enables heterotrophic growth of the obligate photoautotrophic red alga Cyanidioschyzon merolae. Plant Direct 3/4 e00134- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Fujiwara T., Hirooka S., Mukai M., Ohbayashi R., Kanesaki Y., Watanabe S., Miyagishima SY. [DOI] [42]. Coordination of Polyploid Chromosome Replication with Cell Size and Growth in a Cyanobacterium. mBio 10/2 e00510-19- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Ohbayashi R., Nakamachi A., Hatakeyama TS., Watanabe S., Kanesaki Y., Chibazakura T., Yoshikawa H., Miyagishima SY. [DOI] [43]. Algal Protein Kinase, Triacylglycerol Accumulation Regulator1, Modulates Cell Viability and Gametogenesis in Carbon/Nitrogen Imbalanced Conditions. Plant and Cell Physiology 60/4 916-930 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Shinkawa H, Kajikawa M, Nomura Y, Ogura M, Sawaragi Y, Yamano T, Nakagami H, Sugiyama N, Ishihama Y, Kanesaki Y, Yoshikawa H, Fukuzawa H. [DOI] [44]. Complete genome sequence of the marine bacterium Erythrobacter flavus strain KJ5. Microbiology Resource Announcements 8/13 e00140-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Kanesaki Y, Setiyono E, Pringgenies D, Moriuchi R, Brotosudarmo THP, Awai K. [DOI] [45]. Physiological properties and genetic analysis related to exopolysaccharide (EPS) production in the fresh-water unicellular cyanobacterium Aphanothece sacrum (Suizenji Nori). The Journal of General and Applied Microbiology 65/1 39-46 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Ohki K, Kanesaki Y, Suzuki N, Okajima M, Kaneko T, Yoshikawa S [DOI] [46]. Comparative genome analysis of Aspergillus flavus clinically isolated in Japan. DNA Research 26/1 95-103 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Toyotome T, Hamada S, Yamaguchi S, Takahashi H, Kondoh D, Takino M, Kanesaki Y, Kamei K. [DOI] [47]. Identification of metabolic engineering targets for improving glycerol assimilation ability of Saccharomyces cerevisiae based on adaptive laboratory evolution and transcriptome analysis. Journal of Bioscience and Bioengineering 128/ 2 162- 169 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kawai K, Kanesaki Y, Yoshikawa H, Hirasawa T. [DOI] [48]. Complete genome sequence of 3-chlorobenzoate-degrading bacterium Cupriavidus necator NH9 and reclassification of the strains of the genera Cupriavidus and Ralstonia based on phylogenetic and whole-genome sequence analyses Frontiers in Microbiology 10/ 133- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Moriuchi R., Dohra H., Kanesaki Y., Ogawa N. [DOI] [49]. Actinomyces denticolens as a causative agent of actinomycosis in animals Journal of Veterinary Medical Science 80/11 1650-1656 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Murakami S, Kobayashi T, Sekigawa Y, Torii Y, Kanesaki Y, Ishige T, Yokoyama E, Ishiwata H, Hamada M, Tamura T. [DOI] [50]. Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum. The Journal of General and Applied Microbiology 64/5 203-211 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Inoue-Sakamoto K,Nazifi E,Tsuji C,Asano T,Nishiuchi T,Matsugo S,Ishihara K,Kanesaki Y,Yoshikawa H, Sakamoto T [DOI] [51]. In vitro and in silico characterisation of Lactobacillus paraplantarum D2-1, a starter culture for soymilk fermentation. International Journal of Food Sciences and Nutrition 69/7 857-869 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Endo A, Sasaki F, Maeno S, Kanesaki Y, Hamaguchi Y, Torres GA, Tomita S, Nakagawa J [DOI] [52]. Newly Identified Nucleoid-Associated-Like Protein YlxR Regulates Metabolic Gene Expression in Bacillus subtilis. mSphere 3/5 e00501-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Ogura M, Kanesaki Y. [DOI] [53]. Linear Regression Links Transcriptomic Data and Cellular Raman Spectra. Cell Systems 7/1 104-117.e4 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kobayashi-Kirschvink KJ,Nakaoka H,Oda A,Kamei KF,Nosho K,Fukushima H,Kanesaki Y,Yajima S,Masaki H,Ohta K, Wakamoto Y [DOI] [54]. Transcriptional activation of glycogen catabolism and oxidative pentose phosphate pathway by NrrA facilitates cell survival under nitrogen starvation in the cyanobacterium Synechococcus sp. strain PCC 7002. Plant and Cell Physiology 59/6 1225-1233 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Shimmori Y,Kanesaki Y,Nozawa M,Yoshikawa H, Ehira S [DOI] [55]. Identification of the novel hcbB operon catalyzing the dechlorination of pentachlorophenol in the Gram-positive bacterium Nocardioides sp. strain PD653. Journal of Pesticide Science 43/2 124-131 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] Ito K,Takagi K,Matsushima Y,Iwasaki A,Tanaka N,Kanesaki Y,Martin-Laurent F,Igimi S [DOI] [56]. Mutations responsible for alcohol tolerance in the mutant of Synechococcus elongatus PCC 7942 (SY1043) obtained by single-cell screening system. Journal of Bioscience and Bioengineering 125/5 572-577 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Hirokawa Y,Kanesaki Y,Arai S,Saruta F,Hayashihara K,Murakami A,Shimizu K,Honda H,Yoshikawa H, Hanai T [DOI] [57]. Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain. FEBS Open Bio 8/6 947-961 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Kimata S,Mochizuki D,Sato J,Kitano K,Kanesaki Y,Takeda K,Abe A,Kawasaki S, Niimura Y [DOI] [58]. Draft Genome Sequence of Bacillus licheniformis Heshi-B2, Isolated from Fermented Rice Bran in a Japanese Fermented Seafood Dish. Genome Announcements 6/10 e00118-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] author [Author] Kanesaki Y,Kubota E,Ohtake R,Higashi Y,Nagaoka J, Suzuki T, Sayuri Akuzawa S. [DOI] [59]. Complete Genome Sequence of the Nonheterocystous Cyanobacterium Pseudanabaena sp. ABRG5-3. Genome Announcements 6/6 e01608-17- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Tajima N,Kanesaki Y,Sato S,Yoshikawa H,Maruyama F,Kurokawa K,Ohta H,Nishizawa T,Asayama M, Sato N [DOI] [60]. Draft Genome Sequence of the Nitrogen-Fixing and Hormogonia-Inducing Cyanobacterium Nostoc cycadae Strain WK-1, Isolated from the Coralloid Roots of Cycas revoluta. Genome Announcements 6/7 e00021-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] author [Author] Kanesaki Y,Hirose M,Hirose Y,Fujisawa T,Nakamura Y,Watanabe S,Matsunaga S,Uchida H,Murakami A [DOI] [61]. ParA-like protein influences the distribution of multi-copy chromosomes in cyanobacterium Synechococcus elongatus PCC 7942. Microbiology 164/1 45-56 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] Watanabe S,Noda A,Ohbayashi R,Uchioke K,Kurihara A,Nakatake S,Morioka S,Kanesaki Y,Chibazakura T, Yoshikawa H [DOI] [62]. The 100%-Complete Nuclear and Organellar Genome Sequences of the Ultrasmall Red Algal Species Cyanidioschyzon merolae 10D. 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Comparison between the free-radical-scavenging activities with vitamin E and ubiquinol in biological systems based on their reaction rates: a research account. Biofactors 32/1-4 49-58 (2008) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Mukai K [共著者]Tokunaga A,Itoh S,Kanesaki Y,Ouchi A,Ohara K,Nagaoka S,Abe K. [118]. Histidine kinases play important roles in the perception and signal transduction of H2O2 in the cyanobacterium, Synechocystis. The Plant Journal 49/2 313-324 (2007) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Murata N [共著者]Kanesaki Y,Yamamoto H,Paithoonrangsarid K,Shoumskaya M,Suzuki I,Hayashi H [119]. Structure-activity relationship of the free-radical-scavenging reaction by vitamin E (alpha-, beta-, gamma-, delta-Tocopherols) and ubiquinol-10: pH dependence of the reaction rates. Journal of Physical Chemistry B 111/3 652-655 (2007) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Mukai K [共著者]Tokunaga A,Itoh S,Kanesaki Y,Ohara K,Nagaoka S,Abe K [120]. Positive regulation of sugar catabolic pathways in the cyanobacterium Synechocystis sp. PCC 6803 by the group 2 sigma factor sigE. Journal Biological Chemistry 280/35 30653-30659 (2005) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Tanaka K [共著者]Osanai T,Kanesaki Y,Nakano T,Takahashi H,Asayama M,Shirai M,Kanehisa M,Suzuki I,Murata N [121]. The histidine kinase Hik34 is involved in thermotolerance by regulating the expression of heat shock genes in synechocystis. Plant Physiology 138/3 1409-1421 (2005) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Murata N [共著者]Suzuki I,Kanesaki Y,Hayashi H,Hall JJ,Simon WJ,Slabas AR [122]. Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extents in synechocystis. Journal Biological Chemistry 280/22 21531-21538 (2005) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper [Lead author or co-author] co-author [Author] [責任著者]Murata N [共著者]Shoumskaya MA,Paithoonrangsarid K,Kanesaki Y,Los DA,Zinchenko VV,Tanticharoen M,Suzuki I [123]. Five histidine kinases perceive osmotic stress and regulate distinct sets of genes in Synechocystis. 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[1]. Complete genome sequence of Paraburkholderia sp. strain 22B1P capable of utilizing 3-chlorobenzoate as a carbon source.
Microbiology Resource Announcements 13/4 - e0123523 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Moriuchi R., Sano R., Fujii S., Suzuki Y., Makita M., Kawashima Y., Shirakawa T., Shindo R., Shinkai T., Miura K., Hirose M., Nakajima M., Kurokawa A., Chetia R., Hirokawa C., Suzuki T., Ito Y., Murano H., Dohra H., Ogawa N., Kanesaki Y. [URL] [DOI]
[2]. A high-temperature sensitivity of Synechococcus elongatus PCC 7942 due to a tRNA-Leu mutation.
The Journal of General and Applied Microbiology 69/3 164-174 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Hasegawa H., Kanesaki Y., Watanabe S., and Tanaka K. [DOI]
[3]. Implication of amino acid metabolism and cell surface integrity for the thermotolerance mechanism in the thermally adapted acetic acid bacterium Acetobacter pasteurianus TH-3.
Journal of Bacteriology / - (2023) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Matsumoto N., Matsutani M., Tanimoto Y., Nakanishi R., Tanaka S., Kanesaki Y., Theeragool G., Kataoka N., Yakushi T. and Matsushita K. [DOI]
[4]. yaaJ, the tRNA-Specific Adenosine Deaminase, Is Dispensable in Bacillus subtilis.
Genes 14/8 - 1515 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Soma A., Kubota A., Tomoe D., Ikeuchi Y., Kawamura F., Arimoto H., Shiwa Y., Kanesaki Y., Nanamiya H., Yoshikawa H., Suzuki T., and Sekine Y. [DOI]
[5]. Class II LitR serves as an effector of “short” LOV-type blue-light photoreceptor in Pseudomonas mendocina.
Scientific Reports 12/1 - 21765 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[6]. Possible involvement of extracellular polymeric substrates of Antarctic cyanobacterium Nostoc sp. strain SO-36 in adaptation to harsh environments.
Journal of Plant Research 135/6 771-784 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[7]. Mutations in degP and spoT Genes Mediate Response to Fermentation Stress in Thermally Adapted Strains of Acetic Acid Bacterium Komagataeibacter medellinensis NBRC 3288.
Frontiers in Microbiology 13/ - 802010 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Kataoka N, Matsutani M, Matsumoto N, Oda M, Mizumachi Y, Ito K, Tanaka S, Kanesaki Y, Yakushi T, Matsushita K. [DOI]
[8]. Evolutionary Adaptation by Repetitive Long-Term Cultivation with Gradual Increase in Temperature for Acquiring Multi-Stress Tolerance and High Ethanol Productivity in Kluyveromyces marxianus DMKU 3-1042
Microorganisms 10/4 - 798 (2022) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[Author] Pattanakittivorakul S., Tsuzuno T., Kosaka T., Murata M., Kanesaki Y., Yoshikawa H., Limtong S. and Yamada M. [DOI]
[9]. Draft Genome Sequence of Lactiplantibacillus plantarum NMZ-1139, Isolated from Whisky Mash.
Microbiology Resource Announcements 10/49 - e0100821 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Takagi H, Moriuchi R, Kanesaki Y, Katsuyama S, Suzuki M, Mochizuki R, Yokozawa K, Iwahara K, Dohra H. [DOI]
[10]. RNA-seq analysis identified glucose-responsive genes and YqfO as a global regulator in Bacillus subtilis.
BMC Research Notes 14/1 - 450 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Kanesaki Y, Ogura M [DOI]
[11]. Physiological and genomic analysis of newly-isolated polysaccharide synthesizing cyanobacterium Chroococcus sp. FPU101 and chemical analysis of the exopolysaccharide.
The Journal of General and Applied Microbiology 67/ 207-213 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[12]. Genome sequencing of the NIES Cyanobacteria collection with a focus on the heterocyst-forming clade.
DNA Research 28/6 - dsab024 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Hirose Y, Ohtsubo Y, Misawa N, Yonekawa C, Nagao N, Shimura Y, Fujisawa T, Kanesaki Y, Katoh H, Katayama M, Yamaguchi H, Yoshikawa H, Ikeuchi M, Eki T, Nakamura Y, Kawachi M. [DOI]
[13]. Transcriptome differences between Cupriavidus necator NH9 grown with 3-chlorobenzoate and that grown with benzoate.
Bioscience Biotechnology and Biochemistry 85/6 1546-1561 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Moriuchi R, Dohra H, Kanesaki Y, Ogawa N [DOI]
[14]. Identification of Transcription Factors and the Regulatory Genes Involved in Triacylglycerol Accumulation in the Unicellular Red Alga Cyanidioschyzon merolae
Plants 10/5 - 971 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[15]. Reacquisition of light-harvesting genes in a marine cyanobacterium confers a broader solar niche.
Current Biology 31/7 1539-1546 (2021) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[16]. 16S rRNA Gene Amplicon Sequencing of Gut Microbiota in Three Species of Deep-Sea Fish in Suruga Bay, Japan
Microbiology Resource Announcements 10/1 -- e01260-20 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Iwatsuki T, Kanazawa T, Ogasawara T, Hosotani K, Tsuchiya K, Watanabe S, Suzuki T, Moriuchi R, Kanesaki Y, Dohra H [DOI]
[17]. The Rubisco small subunits in the green algal genus Chloromonas provide insights into evolutionary loss of the eukaryotic carbon-concentrating organelle, the pyrenoid.
BMC Ecology and Evolution 21/ - 11 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[18]. Complete sequence and structure of the genome of the harmful algal bloom-forming cyanobacterium Planktothrix agardhii NIES-204T and detailed analysis of secondary metabolite gene clusters.
Harmful Algae 101/ 101942- (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[19]. Transcriptome profile of carbon catabolite repression in an efficient l-(+)-lactic acid-producing bacterium Enterococcus mundtii QU25 grown in media with combinations of cellobiose, xylose, and glucose.
PLoS One 15/11 e0242070- (2020) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[Author] Shiwa Y, Fujiwara H, Numaguchi M, Abdel-Rahman MA, Nabeta K, Kanesaki Y, Tashiro Y, Zendo T, Tanaka N, Fujita N, Yoshikawa H, Sonomoto K, Shimizu-Kadota M. [DOI]
[20]. Changes in the transcriptome, ploidy, and optimal light intensity of a cryptomonad upon integration into a kleptoplastic dinoflagellate.
The ISME Journal 14/10 2407-2423 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[21]. The CRP-family Transcriptional Regulator DevH Regulates Expression of Heterocyst-Specific Genes at the Later Stage of Differentiation in the Cyanobacterium Anabaena sp. Strain PCC 7120.
Molecular Microbiology 114/ 4 553- 562 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[22]. Bacillus subtilis Nucleoid-Associated Protein YlxR Is Involved in Bimodal Expression of the Fructoselysine Utilization Operon (frlBONMD-yurJ) Promoter
Frontiers in Microbiolgy 11/ 2024- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[23]. Fpr1, a Primary Target of Rapamycin, Functions as a Transcription Factor for Ribosomal Protein Genes Cooperatively With Hmo1 in Saccharomyces Cerevisiae
PLoS Genetics 16/6 e1008865- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[25]. Acclimation process of the chlorophyll d-bearing cyanobacterium Acaryochloris marina to orange light environment revealed by transcriptomic analysis and electron microscopic observation.
The Journal of General and Applied Microbiology 66/ 2 106- 115 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[26]. Characteristics of physiology of and genomic mutations in aggregation-enhanced mutants of Methanothermobacter sp. CaT2.
Bioscience Biotechnology and Biochemistry 84/ 5 1047- 1055 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[27]. H-NS Family Proteins Drastically Change Their Targets in Response to the Horizontal Transfer of the Catabolic Plasmid pCAR1.
Frontiers in Microbiology 11/ 1019- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[28]. RNase E-dependent Degradation of tnaA mRNA Encoding Tryptophanase Is Prerequisite for the Induction of Acid Resistance in Escherichia Coli.
Scientific Reports 10/1 7128- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[29]. Evolutionary Changes in DnaA-Dependent Chromosomal Replication in Cyanobacteria.
Frontiers in Microbiology 11/ 786- (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[30]. Novel (p)ppGpp0 suppressor mutations reveal an unexpected link between methionine catabolism and GTP synthesis in Bacillus subtilis.
Molecular Microbiology / - (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Osaka N., Kanesaki Y., Watanabe M., Watanabe S., Chibazakura T., Takada H., Yoshikawa H., Asai K. [DOI]
[31]. Genes regulated by branched-chain polyamine in the hyperthermophilic archaeon Thermococcus kodakarensis.
Amino Acids 52/2 287-299 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[32]. Responses of unicellular predators to cope with the phototoxicity of photosynthetic prey.
Nature Communications 10/1 5606- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[33]. A pseudo-fructophilic Leuconostoc citreum strain F192-5 isolated from the peel of satsuma mandarin.
Applied and Environmental Microbiology 85/20 e01077-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[34]. Interplay and Targetome of the Two Conserved Cyanobacterial sRNAs Yfr1 and Yfr2 in Prochlorococcus MED4.
Scientific Reports 9/1 14331- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[35]. Ubr1p-Cup9p-Ptr2p pathway involves in the sensitivity to readthrough compounds negamycin derivatives in budding yeast.
Bioscience Biotechnology and Biochemistry 83/10 1889-1892 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[36]. Free flavins accelerate release of ferrous iron from iron storage proteins by both free flavin-dependent and -independent ferric reductases in Escherichia coli.
The Journal of General and Applied Microbiology 65/6 308-315 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Satoh J, Kimata S, Nakamoto S, Ishii T, Tanaka E, Yumoto S, Takeda K, Yoshimura E, Kanesaki Y, Ishige T, Tanaka K, Abe A, Kawasaki S, Niimura Y. [DOI]
[37]. Sulfur-Containing Carotenoids from A Marine Coral Symbiont Erythrobacter flavus Strain KJ5.
Marine Drugs 17/6 E349- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[38]. Draft Genome Sequence of Zygosaccharomyces mellis CA-7, Isolated from Honey.
Microbiology Resource Announcements 8/ 26 e00449-19- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[39]. Capacity for survival in global warming: Adaptation of mesophiles to the temperature upper limit.
PLoS One 14/5 e0215614- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
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[Author] Kosaka T., Nakajima Y., Ishii A., Yamashita M., Yoshida S., Murata M., Kato K., Shiromaru Y., Kato S., Kanesaki Y., Yoshikawa H., Matsutani M., Thanonkeo P., Yamada M. [DOI]
[40]. Complete Genome Sequence of Enterococcus faecium QU50, a Thermophilic Lactic Acid Bacterium Capable of Metabolizing Xylose.
Microbiology Resource Announcements 8/21 e00413-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Abe K, Kanesaki Y, Abdel-Rahman MA, Watanabe S, Zendo T, Chibazakura T, Shimizu-Kadota M, Sonomoto K, Yoshikawa H [DOI]
[41]. Integration of a Galdieria plasma membrane sugar transporter enables heterotrophic growth of the obligate photoautotrophic red alga Cyanidioschyzon merolae.
Plant Direct 3/4 e00134- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Fujiwara T., Hirooka S., Mukai M., Ohbayashi R., Kanesaki Y., Watanabe S., Miyagishima SY. [DOI]
[42]. Coordination of Polyploid Chromosome Replication with Cell Size and Growth in a Cyanobacterium.
mBio 10/2 e00510-19- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Ohbayashi R., Nakamachi A., Hatakeyama TS., Watanabe S., Kanesaki Y., Chibazakura T., Yoshikawa H., Miyagishima SY. [DOI]
[43]. Algal Protein Kinase, Triacylglycerol Accumulation Regulator1, Modulates Cell Viability and Gametogenesis in Carbon/Nitrogen Imbalanced Conditions.
Plant and Cell Physiology 60/4 916-930 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Shinkawa H, Kajikawa M, Nomura Y, Ogura M, Sawaragi Y, Yamano T, Nakagami H, Sugiyama N, Ishihama Y, Kanesaki Y, Yoshikawa H, Fukuzawa H. [DOI]
[44]. Complete genome sequence of the marine bacterium Erythrobacter flavus strain KJ5.
Microbiology Resource Announcements 8/13 e00140-19- (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kanesaki Y, Setiyono E, Pringgenies D, Moriuchi R, Brotosudarmo THP, Awai K. [DOI]
[45]. Physiological properties and genetic analysis related to exopolysaccharide (EPS) production in the fresh-water unicellular cyanobacterium Aphanothece sacrum (Suizenji Nori).
The Journal of General and Applied Microbiology 65/1 39-46 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Ohki K, Kanesaki Y, Suzuki N, Okajima M, Kaneko T, Yoshikawa S [DOI]
[46]. Comparative genome analysis of Aspergillus flavus clinically isolated in Japan.
DNA Research 26/1 95-103 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Toyotome T, Hamada S, Yamaguchi S, Takahashi H, Kondoh D, Takino M, Kanesaki Y, Kamei K. [DOI]
[47]. Identification of metabolic engineering targets for improving glycerol assimilation ability of Saccharomyces cerevisiae based on adaptive laboratory evolution and transcriptome analysis.
Journal of Bioscience and Bioengineering 128/ 2 162- 169 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kawai K, Kanesaki Y, Yoshikawa H, Hirasawa T. [DOI]
[48]. Complete genome sequence of 3-chlorobenzoate-degrading bacterium Cupriavidus necator NH9 and reclassification of the strains of the genera Cupriavidus and Ralstonia based on phylogenetic and whole-genome sequence analyses
Frontiers in Microbiology 10/ 133- (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Moriuchi R., Dohra H., Kanesaki Y., Ogawa N. [DOI]
[49]. Actinomyces denticolens as a causative agent of actinomycosis in animals
Journal of Veterinary Medical Science 80/11 1650-1656 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Murakami S, Kobayashi T, Sekigawa Y, Torii Y, Kanesaki Y, Ishige T, Yokoyama E, Ishiwata H, Hamada M, Tamura T. [DOI]
[50]. Characterization of mycosporine-like amino acids in the cyanobacterium Nostoc verrucosum.
The Journal of General and Applied Microbiology 64/5 203-211 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Inoue-Sakamoto K,Nazifi E,Tsuji C,Asano T,Nishiuchi T,Matsugo S,Ishihara K,Kanesaki Y,Yoshikawa H, Sakamoto T [DOI]
[51]. In vitro and in silico characterisation of Lactobacillus paraplantarum D2-1, a starter culture for soymilk fermentation.
International Journal of Food Sciences and Nutrition 69/7 857-869 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Endo A, Sasaki F, Maeno S, Kanesaki Y, Hamaguchi Y, Torres GA, Tomita S, Nakagawa J [DOI]
[52]. Newly Identified Nucleoid-Associated-Like Protein YlxR Regulates Metabolic Gene Expression in Bacillus subtilis.
mSphere 3/5 e00501-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Ogura M, Kanesaki Y. [DOI]
[53]. Linear Regression Links Transcriptomic Data and Cellular Raman Spectra.
Cell Systems 7/1 104-117.e4 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kobayashi-Kirschvink KJ,Nakaoka H,Oda A,Kamei KF,Nosho K,Fukushima H,Kanesaki Y,Yajima S,Masaki H,Ohta K, Wakamoto Y [DOI]
[54]. Transcriptional activation of glycogen catabolism and oxidative pentose phosphate pathway by NrrA facilitates cell survival under nitrogen starvation in the cyanobacterium Synechococcus sp. strain PCC 7002.
Plant and Cell Physiology 59/6 1225-1233 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Shimmori Y,Kanesaki Y,Nozawa M,Yoshikawa H, Ehira S [DOI]
[55]. Identification of the novel hcbB operon catalyzing the dechlorination of pentachlorophenol in the Gram-positive bacterium Nocardioides sp. strain PD653.
Journal of Pesticide Science 43/2 124-131 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Ito K,Takagi K,Matsushima Y,Iwasaki A,Tanaka N,Kanesaki Y,Martin-Laurent F,Igimi S [DOI]
[56]. Mutations responsible for alcohol tolerance in the mutant of Synechococcus elongatus PCC 7942 (SY1043) obtained by single-cell screening system.
Journal of Bioscience and Bioengineering 125/5 572-577 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hirokawa Y,Kanesaki Y,Arai S,Saruta F,Hayashihara K,Murakami A,Shimizu K,Honda H,Yoshikawa H, Hanai T [DOI]
[57]. Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain.
FEBS Open Bio 8/6 947-961 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kimata S,Mochizuki D,Sato J,Kitano K,Kanesaki Y,Takeda K,Abe A,Kawasaki S, Niimura Y [DOI]
[58]. Draft Genome Sequence of Bacillus licheniformis Heshi-B2, Isolated from Fermented Rice Bran in a Japanese Fermented Seafood Dish.
Genome Announcements 6/10 e00118-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Kanesaki Y,Kubota E,Ohtake R,Higashi Y,Nagaoka J, Suzuki T, Sayuri Akuzawa S. [DOI]
[59]. Complete Genome Sequence of the Nonheterocystous Cyanobacterium Pseudanabaena sp. ABRG5-3.
Genome Announcements 6/6 e01608-17- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Tajima N,Kanesaki Y,Sato S,Yoshikawa H,Maruyama F,Kurokawa K,Ohta H,Nishizawa T,Asayama M, Sato N [DOI]
[60]. Draft Genome Sequence of the Nitrogen-Fixing and Hormogonia-Inducing Cyanobacterium Nostoc cycadae Strain WK-1, Isolated from the Coralloid Roots of Cycas revoluta.
Genome Announcements 6/7 e00021-18- (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Kanesaki Y,Hirose M,Hirose Y,Fujisawa T,Nakamura Y,Watanabe S,Matsunaga S,Uchida H,Murakami A [DOI]
[61]. ParA-like protein influences the distribution of multi-copy chromosomes in cyanobacterium Synechococcus elongatus PCC 7942.
Microbiology 164/1 45-56 (2018) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Watanabe S,Noda A,Ohbayashi R,Uchioke K,Kurihara A,Nakatake S,Morioka S,Kanesaki Y,Chibazakura T, Yoshikawa H [DOI]
[62]. The 100%-Complete Nuclear and Organellar Genome Sequences of the Ultrasmall Red Algal Species Cyanidioschyzon merolae 10D.
Cyanidioschyzon merolae, A New Model Eukaryote for Cell and Organelle Biology / 61-72 (2017) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Hisayoshi Nozaki [共著者]Yu Kanesaki,Motomichi Matsuzaki,Shunzuke Hirooka [Notes] 総説。紅藻シゾンのセントロメア領域に関する事項やゲノム情報が解読されたことで可能になった解析技法に関する部分を執筆。
[DOI]
[63]. Control of Cell Nuclear DNA Replication by Chloroplast and Mitochondrion.
Cyanidioschyzon merolae, A New Model Eukaryote for Cell and Organelle Biology / 195-204 (2017) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Kan Tanaka [共著者]Yuki Kobayashi,Yu Kanesaki,Mitsumasa Hanaoka [Notes] 総説。共同研究につき本人担当部分抽出不可能。
[DOI]
[64]. Identification of the hcb gene operon involved in catalyzing aerobic hexachlorobenzene dechlorination in Nocardioides sp. strain PD653.
Applied and Environmental Microbiology 83/19 e00824-17 - (2017) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Takagi K [共著者]Ito K,Takagi K,Iwasaki A,Tanaka N,Kanesaki Y,Martin-Laurent F,Igimi S
[65]. Acidophilic green algal genome provides insights into adaptation to an acidic environment.
Proceedings of the National Academy of Sciences USA 114/39 E8304-E8313 (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hirooka S,Hirose Y,Kanesaki Y,Higuchi S,Fujiwara T,Onuma R,Era A,Ohbayashi R,Uzuka A,Nozaki H,Yoshikawa H, Miyagishima SY [DOI]
[66]. Surface Sensing for Paenibacillus sp. NAIST15-1 Flagellar Gene Expression on Solid Medium.
Applied and Environmental Microbiology 83/15 e00585-17- (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Kobayashi K [共著者]Kanesaki Y,Yoshikawa H
[67].
BSJ-Review 8/ 135-140 (2017) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] 兼崎友
[68]. Complete Genome Sequence of a Coastal Cyanobacterium, Synechococcus sp. Strain NIES-970.
Genome Announcements 5/14 e00139-17- (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Shimura Y,Hirose Y,Misawa N,Wakazuki S,Fujisawa T,Nakamura Y,Kanesaki Y,Yamaguchi H, Kawachi M.
[69]. Whole-Genome Sequences of Two Closely Related Bacteria, Actinomyces sp. Strain Chiba101 and Actinomyces denticolens DSM 20671T.
Genome Announcements 5/14 e00126-17- (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Kanesaki Y,Murakami S [共著者]Ishige T,Sekigawa Y,Kobayashi T,Torii Y,Yokoyama E,Ishiwata H,Hamada M,Tamura T,Azuma R
[70]. Conserved two-component Hik34-Rre1 module directly activates heat-stress inducible transcription of major chaperone and other genes in Synechococcus elongatus PCC 7942.
Molecular Microbiology 104/2 260-277 (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Kobayashi I,Watanabe S,Kanesaki Y,Shimada T,Yoshikawa H
[71].
95/3 136-139 (2017) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] 兼崎友
[72]. Variety of DNA Replication Activity Among Cyanobacteria Correlates with Distinct Respiration Activity in the Dark.
Plant and Cell Physiology 58/2 279-286 (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yoshikawa H [共著者]Ohbayashi R,Yamamoto JY,Watanabe S,Kanesaki Y,Chibazakura T,Miyagishima SY
[73]. Genome Mining of Amino Group Carrier Protein-Mediated Machinery: Discovery and Biosynthetic Characterization of a Natural Product with Unique Hydrazone Unit.
ACS Chemical Biology 12/1 124-131 (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Nishiyama M [共著者]Matsuda K,Hasebe F,Shiwa Y,Kanesaki Y,Tomita T,Yoshikawa H,Shin-Ya K,Kuzuyama T
[74]. CyanoBase: a large-scale update on its 20th anniversary.
Nucleic Acids Research 45/D1 D551-D554 (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Fujisawa T,Narikawa R,Maeda SI,Watanabe S,Kanesaki Y,Kobayashi K,Nomata J,Hanaoka M,Watanabe M,Ehira S,Suzuki E,Awai K, Nakamura Y [DOI]
[75]. Genomic characterization of a fructophilic bee symbiont Lactobacillus kunkeei reveals its niche-specific adaptation.
Systematic and Applied Microbiology 39/8 516-526 (2016) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Endo A [共著者]Maeno S,Tanizawa Y,Kanesaki Y,Kubota E,Kumar H,Dicks L,Salminen S,Nakagawa J,Arita M
[76]. Chloroplast-mediated regulation of CO2-concentrating mechanism by Ca2+-binding protein CAS in the green alga Chlamydomonas reinhardtii.
Proceedings of the National Academy of Sciences USA 113/44 12586-12591 (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Fukuzawa H [共著者]Wang L,Yamano T,Takane S,Niikawa Y,Toyokawa C,Ozawa SI,Tokutsu R,Takahashi Y,Minagawa J,Kanesaki Y,Yoshikawa H
[77]. Draft Genome Sequences of Bradyrhizobium elkanii Strains BLY3-8 and BLY6-1, Which Are Incompatible with Rj3 Genotype Soybean Cultivars.
Genome Announcements 4/5 e01169-16- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yamakawa T [共著者]Zaw Htwe A,Kanesaki Y,Yoshikawa H,Tsurumaru H
[78]. Genetic Analysis of Collective Motility of Paenibacillus sp. NAIST15-1.
PLoS Genetics 12/10 e1006387- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Kobayashi K [共著者]Kanesaki Y,Yoshikawa H
[79]. Draft Genome Sequence of Microbacterium sp. Strain HM58-2, Which Hydrolyzes Acylhydrazides.
Genome Announcements 4/3 e00554-16- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yajima S [共著者]Ishige T,Kanesaki Y,Ito S,Oinuma K,Takaya N,Sasaki Y
[80]. Draft Genome Sequence of Paenibacillus amylolyticus Heshi-A3, Isolated from Fermented Rice Bran in a Japanese Fermented Seafood Dish.
Genome Announcements 4/2 e00218-16- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Kanesaki Y,Akuzawa S [共著者]Nagaoka J,Kanekatsu M,Kubota E,Ohtake R,Suzuki T
[81]. Diversification of DnaA dependency for DNA replication in cyanobacterial evolution.
The ISME Journal 10/5 1113-1121 (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yoshikawa H [共著者]Ohbayashi R,Watanabe S,Ehira S,Kanesaki Y,Chibazakura T
[82]. Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.
Journal of Biotechnology 220/ 45-46 (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Kanesaki Y,Hirose Y [共著者]Fujisawa T,Ohtsubo Y,Katayama M,Misawa N,Wakazuki S,Shimura Y,Nakamura Y,Kawachi M,Yoshikawa H,Eki T
[83]. Draft Genome Sequence of Oceanobacillus picturae Heshi-B3, Isolated from Fermented Rice Bran in a Traditional Japanese Seafood Dish.
Genome Announcements 4/1 e01621-15- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Akuzawa S,Suzuki T [共著者]Nagaoka J,Kanekatsu M,Kanesaki Y
[84]. Complete genome sequence of cyanobacterium Nostoc sp. NIES-3756, a potentially useful strain for phytochrome-based bioengineering.
Journal of Biotechnology 218/ 51-52 (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Kanesaki Y,Hirose Y [共著者]Fujisawa T,Ohtsubo Y,Katayama M,Misawa N,Wakazuki S,Shimura Y,Nakamura Y,Kawachi M,Yoshikawa H,Eki T
[85]. Identification of the Three Genes Involved in Controlling Production of a Phytotoxin Tropolone in Burkholderia plantarii.
Journal of Bacteriology 198/11 1604-1609 (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Utsumi R [共著者]Miwa S,Kihira E,Yoshioka A,Nakasone K,Okamoto S,Hatano M,Igarashi M,Eguchi Y,Kato A,Ichikawa N,Sekine M,Fujita N,Kanesaki Y,Yoshikawa H
[86]. Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-3755.
Genome Announcements 4/2 e00090-16- (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Kanesaki Y,Hirose Y [共著者]Fujisawa T,Ohtsubo Y,Katayama M,Misawa N,Wakazuki S,Shimura Y,Nakamura Y,Kawachi M,Yoshikawa H,Eki T
[87]. Analysis of spontaneous suppressor mutants from the photomixotrophically grown pmgA-disrupted mutant in the cyanobacterium Synechocystis sp. PCC 6803.
Photosynthesis Research 126/2-3 465-475 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Hihara Y [共著者]Nishijima Y,Kanesaki Y,Yoshikawa H,Ogawa T,Sonoike K,Nishiyama Y
[88]. Draft Genome Sequence of Bradyrhizobium japonicum Is-1, Which Is Incompatible with Rj2 Genotype Soybeans.
Genome Announcements 3/5 e01219-15- (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yamakawa T [共著者]Sakata T,Kanesaki Y,Yoshikawa H,Tsurumaru H
[89]. Intensive DNA Replication and Metabolism during the Lag Phase in Cyanobacteria.
PLoS One 10/9 e0136800- (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yoshikawa H [共著者]Watanabe S,Ohbayashi R,Kanesaki Y,Saito N,Chibazakura T,Soga T
[90]. A Putative Type III Secretion System Effector Encoded by the MA20_12780 Gene in Bradyrhizobium japonicum Is-34 Causes Incompatibility with Rj4 Genotype Soybeans.
Applied and Environmental Microbiology 81/17 5812-5819 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yamakawa T [共著者]Tsurumaru H,Hashimoto S,Okizaki K,Kanesaki Y,Yoshikawa H
[91]. A nitrogen source-dependent inducible and repressible gene expression system in the red alga Cyanidioschyzon merolae.
Frontiers in Plant Science 6/ 657- (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Miyagishima SY [共著者]Fujiwara T,Kanesaki Y,Hirooka S,Era A,Sumiya N,Yoshikawa H,Tanaka K
[92]. Genomic analysis of parallel-evolved cyanobacterium Synechocystis sp. PCC 6803 under acid stress.
Photosynthesis Research 125/1-2 243-54 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Ohta H [共著者]Uchiyama J,Kanesaki Y,Iwata N,Asakura R,Funamizu K,Tasaki R,Agatsuma M,Tahara H,Matsuhashi A,Yoshikawa H,Ogawa S
[93]. Identification of genes involved in the phosphate metabolism in Cryptococcus neoformans.
Fungal Genetics and Biology 80/ 19-30 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Toh-e A [共著者]Ohkusu M,Li HM,Shimizu K,Takahashi-Nakaguchi A,Gonoi T,Kawamoto S,Kanesaki Y,Yoshikawa H,Nishizawa M
[94]. Identification of centromere regions in chromosomes of a unicellular red alga, Cyanidioschyzon merolae.
FEBS Letters 589/11 1219-1224 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Kanesaki Y,Imamura S,Matsuzaki M
[95]. Microevolution of Virulence-Related Genes in Helicobacter pylori Familial Infection.
PLoS One 10/5 e0127197- (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Kobayashi I [共著者]Furuta Y,Konno M,Osaki T,Yonezawa H,Ishige T,Imai M,Shiwa Y,Shibata-Hatta M,Kanesaki Y,Yoshikawa H,Kamiya S
[96]. Draft Genome Sequence of Bradyrhizobium japonicum Is-34, Which Is Incompatible with Rj4 Genotype Soybeans.
Genome Announcements 2/6 e01316-14- (2014) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Yamakawa T [共著者]Tsurumaru H,Kanesaki Y,Hashimoto S,Okizaki K,Yoshikawa H
[97]. Complete Genome Sequence of Bifidobacterium longum 105-A, a Strain with High Transformation Efficiency.
Genome Announcements 2/6 e01311-14 - (2014) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Fukiya S,Suzuki T [共著者]Kanesaki Y,Masutani H,Sakanaka M,Shiwa Y,Fujisawa T,Nakamura Y,Yokota A,Yoshikawa H
[98]. Draft genome sequence of strain q-1, an iodide-oxidizing alphaproteobacterium isolated from natural gas brine water.
Genome Announcements 2/4 e00659-14- (2014) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Amachi S [共著者]Ehara A,Suzuki H,Kanesaki Y,Yoshikawa H
[99].
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[Author] [責任著者]吉川博文 [共著者]兼崎　友,志波　優 [Notes] 「第5章12節微生物研究での次世代シークエンサーの有効活用」を執筆。微生物研究での次世代シークエンサーの有効活用方法について解説した。
[100]. Exopolysaccharide production by a unicellular freshwater cyanobacterium Cyanothece sp. isolated from a rice field in Vietnam.
Journal of Applied Phycology 26/1 265-272 (2014) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Ohki K [共著者]Nguyen QT,Yoshikawa S,Kanesaki Y,Okajima M,Kaneko T,Tran HT
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91/8 469-- (2013) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] 兼崎友
[102]. DNA replication depends on photosynthetic electron transport in cyanobacteria.
FEMS Microbiology Letters 344/2 138-144 (2013) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yoshikawa H [共著者]Ohbayashi R,Watanabe S,Kanesaki Y,Narikawa R,Chibazakura T,Ikeuchi M
[103]. External light conditions and internal cell cycle phases coordinate accumulation of chloroplast and mitochondrial transcripts in the red alga Cyanidioschyzon merolae.
DNA Research 19/3 289-303 (2012) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Kanesaki Y,Imamura S,Minoda A
[104]. Iodide oxidation by a novel multicopper oxidase from the alphaproteobacterium strain Q-1.
Applied and Environmental Microbiology 78/11 3941-3949 (2012) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Amachi S [共著者]Suzuki M,Eda Y,Ohsawa S,Kanesaki Y,Yoshikawa H,Tanaka K,Muramatsu Y,Yoshikawa J,Sato I,Fujii T
[105]. Identification of substrain-specific mutations by massively parallel whole-genome resequencing of Synechocystis sp. PCC 6803.
DNA Research 19/1 67-79 (2012) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yoshikawa H [共著者]Kanesaki Y,Shiwa Y,Tajima N,Suzuki M,Watanabe S,Sato N,Ikeuchi M
[106]. Light-dependent and asynchronous replication of cyanobacterial multi-copy chromosomes.
Molecular Microbiology 83/4 856-865 (2012) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Yoshikawa H [共著者]Watanabe S,Ohbayashi R,Shiwa Y,Noda A,Kanesaki Y,Chibazakura T
[107]. Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S.
DNA Research 18/5 393-399 (2011) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] Tajima N,Sato S,Maruyama F,Kaneko T,Sasaki NV,Kurokawa K,Ohta H,Kanesaki Y,Yoshikawa H,Tabata S,Ikeuchi M, Sato N
[108]. Whole-genome resequencing shows numerous genes with nonsynonymous SNPs in the Japanese native cattle Kuchinoshima-Ushi.
BMC Genomics 12/ 103- (2011) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Kono T [共著者]Kawahara-Miki R,Tsuda K,Shiwa Y,Arai-Kichise Y,Matsumoto T,Kanesaki Y,Oda S,Ebihara S,Yajima S,Yoshikawa H
[109].
88/9 477-480 (2010) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]田中寛 [共著者]小林勇気,兼崎友 [Notes] 単細胞紅藻Cyanidioschyzon merolaeにおける細胞周期制御機構について遺伝子発現変動に関する情報を執筆した。
[110]. An RNA helicase, CrhR, regulates the low-temperature-inducible expression of heat-shock genes groES, groEL1 and groEL2 in Synechocystis sp. PCC 6803.
Microbiology 156/2 442-451 (2010) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Prakash JS,Krishna PS,Sirisha K,Kanesaki Y,Suzuki I,Shivaji S
[111]. Sensors and signal transducers of environmental stress in cyanobacteria.
Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genetic Foundation -/- 15-28 (2010) [Refereed] non-refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kanesaki Y,Los DA,Suzuki I, Murata N [Notes] シアノバクテリアの環境ストレス応答に関わるシグナル伝達系についての総説として全般的に執筆。
[112]. Mg-protoporphyrin IX signaling in Cyanidioschyzon merolae: multiple pathways may involve the retrograde signaling in plant cells.
Plant Signaling & Behaviour 4/12 1190-1192 (2009) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
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[Author] [責任著者]Tanaka K [共著者]Kanesaki Y,Kobayashi Y,Hanaoka M
[113]. R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidioschyzon merolae.
Proceedings of the National Academy of Sciences USA 106/33 12548-12553 (2009) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Imamura S,Kanesaki Y,Ohnuma M,Inouye T,Sekine Y,Fujiwara T,Kuroiwa T
[114]. Tetrapyrrole signal as a cell-cycle coordinator from organelle to nuclear DNA replication in plant cells.
Proceedings of the National Academy of Sciences USA 106/3 803-807 (2009) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Kobayashi Y,Kanesaki Y,Tanaka A,Kuroiwa H,Kuroiwa T
[115].
XIII/- 35-41 (2009) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]向井和男 [共著者]徳永愛子,伊藤慎吾,大内　綾,兼崎　友,小原敬士,長岡伸一,阿部皓一 [Notes] ビタミンE研究会編
[116]. Stopped-Flow Kinetic Study of the Aroxyl Radical-Scavenging Action of Catechins and Vitamin C in Ethanol and Micellar Solutions.
Journal of Agricultural and Food Chemistry 56/12 4406-4417 (2008) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Mukai K [共著者]Mitani S,Ouchi A,Watanabe E,Kanesaki Y,Nagaoka S
[117]. Comparison between the free-radical-scavenging activities with vitamin E and ubiquinol in biological systems based on their reaction rates: a research account.
Biofactors 32/1-4 49-58 (2008) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Mukai K [共著者]Tokunaga A,Itoh S,Kanesaki Y,Ouchi A,Ohara K,Nagaoka S,Abe K.
[118]. Histidine kinases play important roles in the perception and signal transduction of H2O2 in the cyanobacterium, Synechocystis.
The Plant Journal 49/2 313-324 (2007) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Kanesaki Y,Yamamoto H,Paithoonrangsarid K,Shoumskaya M,Suzuki I,Hayashi H
[119]. Structure-activity relationship of the free-radical-scavenging reaction by vitamin E (alpha-, beta-, gamma-, delta-Tocopherols) and ubiquinol-10: pH dependence of the reaction rates.
Journal of Physical Chemistry B 111/3 652-655 (2007) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Mukai K [共著者]Tokunaga A,Itoh S,Kanesaki Y,Ohara K,Nagaoka S,Abe K
[120]. Positive regulation of sugar catabolic pathways in the cyanobacterium Synechocystis sp. PCC 6803 by the group 2 sigma factor sigE.
Journal Biological Chemistry 280/35 30653-30659 (2005) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Tanaka K [共著者]Osanai T,Kanesaki Y,Nakano T,Takahashi H,Asayama M,Shirai M,Kanehisa M,Suzuki I,Murata N
[121]. The histidine kinase Hik34 is involved in thermotolerance by regulating the expression of heat shock genes in synechocystis.
Plant Physiology 138/3 1409-1421 (2005) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Suzuki I,Kanesaki Y,Hayashi H,Hall JJ,Simon WJ,Slabas AR
[122]. Identical Hik-Rre systems are involved in perception and transduction of salt signals and hyperosmotic signals but regulate the expression of individual genes to different extents in synechocystis.
Journal Biological Chemistry 280/22 21531-21538 (2005) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Shoumskaya MA,Paithoonrangsarid K,Kanesaki Y,Los DA,Zinchenko VV,Tanticharoen M,Suzuki I
[123]. Five histidine kinases perceive osmotic stress and regulate distinct sets of genes in Synechocystis.
Journal Biological Chemistry 279/51 53078-53086 (2004) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Paithoonrangsarid K,Shoumskaya MA,Kanesaki Y,Satoh S,Tabata S,Los DA,Zinchenko VV,Hayashi H,Tanticharoen M,Suzuki I
[124]. Gene expression profiling reflects physiological processes in salt acclimation of Synechocystis sp. strain PCC 6803.
Plant Physiology 136/2 3290-3300 (2004) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Hageman M [共著者]Marin K,Kanesaki Y,Los DA,Murata N,Suzuki I
[125]. Identification of histidine kinases that act as sensors in the perception of salt stress in Synechocystis sp. PCC 6803.
Proceedings of the National Academy of Sciences USA 100/15 9061-9066 (2003) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Marin K,Suzuki I,Yamaguchi K,Ribbeck K,Yamamoto H,Kanesaki Y,Hagemann M
[126]. Gene-engineered rigidification of membrane lipids enhances the cold inducibility of gene expression in synechocystis.
Journal Biological Chemistry 278/14 12191-12198 (2003) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Inaba M,Suzuki I,Szalontai B,Kanesaki Y,Los DA,Hayashi H
[127]. Salt stress inhibits the repair of photodamaged photosystem II by suppressing the transcription and translation of psbA genes in synechocystis.
Plant Physiology 130/3 1443-1453 (2002) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Allakhverdiev SI,Nishiyama Y,Miyairi S,Yamamoto H,Inagaki N,Kanesaki Y
[128]. The histidine kinase Hik33 perceives osmotic stress and cold stress in Synechocystis sp PCC 6803.
Molecular Microbiology 46/4 905-915 (2002) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Mikami K,Kanesaki Y,Suzuki I
[129]. Salt stress and hyperosmotic stress regulate the expression of different sets of genes in Synechocystis sp. PCC 6803.
Biochememical and Biophysical Research Communications 290/1 339-348 (2002) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Kanesaki Y,Suzuki I,Allakhverdiev SI,Mikami K
[130]. Cold-regulated genes under control of the cold sensor Hik33 in Synechocystis.
Molecular Microbiology 40/1 235-244 (2001) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Suzuki I,Kanesaki Y,Mikami K,Kanehisa M
[131]. The pathway for perception and transduction of low-temperature signals in Synechocystis.
The EMBO Journal 19/6 1327-1334 (2000) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Murata N [共著者]Suzuki I,Los DA,Kanesaki Y,Mikami K
[132]. Free radical-scavenging action of catechin and related compounds in homogeneous and micellar solutions.
Phytochemicals and Phytopharmaceuticals Chapter 20/- 222-238 (2000) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Mukai K [共著者]Kanesaki Y,Egawa Y,Nagaoka S [Notes] Shahidi F., and Ho C.-T., eds. AOC Press, Champaign, Illinois