[1]. Competition-induced metabolic switching governs the interaction network in plant microbiome assembly
/ - (2026) [Refereed] non-refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Rikuya Umemoto, Nanoka Yoshida, Miki Furuya, Yosuke Tashiro, Daisuke Inoue, Michihiko Ike, Masahiro Takeo, Hiroyuki Futamata [URL]
[2]. Competition-induced metabolic switching governs the interaction network in plant microbiome assembly
openRxiv / - (2026) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa, Rikuya Umemoto, Nanoka Yoshida, Miki Furuya, Yosuke Tashiro, Daisuke Inoue, Michihiko Ike, Masahiro Takeo, Hiroyuki Futamata [Notes] 考察の一部を担当
[URL]
[3]. Stable coexistence and phenol-degradation expression of Cupriavidus sp. strain P-10 and Comamonas thiooxydans strain R2 in phenol-competitive chemostat culture.
Applied microbiology and biotechnology 109/1 243-243 (2025) [Refereed] non-refereed
[Lead author or co-author]
[Author] Kenshi Suzuki, Fatma Azwani Abdul Aziz, Masahiro Honjo, Abd Rahman Jabir Bin Mohd Din, Koki Amano, Yosuke Tashiro, Hiroyuki Futamata
[4]. Stable coexistence and phenol-degradation expression of Cupriavidus sp. strain P-10 and Comamonas thiooxydans strain R2 in phenol-competitive chemostat culture.
Applied microbiology and biotechnology 109/1 243-243 (2025) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Kenshi Suzuki, Fatma Azwani Abdul Aziz, Masahiro Honjo, Abd Rahman Jabir Bin Mohd Din, Koki Amano, Yosuke Tashiro, Hiroyuki Futamata
[5]. Role of organic acid-degrading bacteria in a microbial methanation system using a subterranean microbial community.
World journal of microbiology & biotechnology 41/8 286-286 (2025) [Refereed] non-refereed
[Lead author or co-author]
[Author] Makoto Kawano, Kohei Ikeura, Hiroki Taniguchi, Minako Terao, Kota Ichikawa, Takumi Higashi, Hiroyuki Futamata, Hiroyuki Kimura
[6]. Role of organic acid-degrading bacteria in a microbial methanation system using a subterranean microbial community.
World journal of microbiology & biotechnology 41/8 286-286 (2025) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Makoto Kawano, Kohei Ikeura, Hiroki Taniguchi, Minako Terao, Kota Ichikawa, Takumi Higashi, Hiroyuki Futamata, Hiroyuki Kimura [Notes] 考察の一部と分析結果の一部を担当
[7]. A Rechargeable Biomineral Induced by the Sulfate-reducing Bacterium Nitratidesulfovibrio sp. HK-II.
Microbes and environments 40/3 - (2025) [Refereed] non-refereed
[Lead author or co-author]
[Author] Yui Arashi, Hiroki Mochihara, Hiroko Kubota, Kei Suzuki, Yusuke Chiba, Yutaka Kato, Toshihiro Kogure, Ryota Moriuchi, Hideo Dohra, Yuto Nakamura, Yosuke Tashiro, Hiroyuki Futamata
[8]. Biofilm-derived membrane vesicles exhibit potent immunomodulatory activity in Pseudomonas aeruginosa PAO1
Microbiol. Immunol 68/7 224-236 (2025) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] So Ueno, Mizuki Kanno, Shakhina Sharan, Hiroyuki Futamata, Ryoma Nakano and Yosuke Tashiro [Notes] Biofilmに関する考察
[DOI]
[9]. A Rechargeable Biomineral Induced by the Sulfate-reducing Bacterium Nitratidesulfovibrio sp. HK-II.
Microbes and environments 40/3 - (2025) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Yui Arashi, Hiroki Mochihara, Hiroko Kubota, Kei Suzuki, Yusuke Chiba, Yutaka Kato, Toshihiro Kogure, Ryota Moriuchi, Hideo Dohra, Yuto Nakamura, Yosuke Tashiro, Hiroyuki Futamata
[10]. Uncovering the causal relationships in plant-microbe ecosystems: A time series analysis of the duckweed cultivation system for biomass production and wastewater treatment.
The Science of the total environment 957/ 177717-177717 (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Yosuke Tashiro, Takashi Okada, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata
[11]. High throughput apparatus for testing of silicon nitride membranes used in preparation of samples for atmospheric scanning electron microscopy
IEEE Xplore Conference / - (2024) [Refereed] refereed
[Lead author or co-author]
[Author] Kretkowski Maciej, Hiroyuki Futamata, Wataru Inami, Yoshimasa Kawata
[12]. Uncovering the causal relationships in plant-microbe ecosystems: A time series analysis of the duckweed cultivation system for biomass production and wastewater treatment.
Science of the Total Environment 20/957 - 177717 (2024) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa*, Yosuke Tashiro, Takashi Okada, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata [Notes] 水処理に関する部分
[DOI]
[13]. High throughput apparatus for testing of silicon nitride membranes used in preparation of samples for atmospheric scanning electron microscopy
IEEE Xplore Conference / - (2024) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kretkowski Maciej, Hiroyuki Futamata, Wataru Inami, and Yoshimasa Kawata [Notes] 実験結果
[DOI]
[14]. Uncovering the causal relationships in plant-microbe ecosystems: A time series analysis of the duckweed cultivation system for biomass production and wastewater treatment.
The Science of the total environment 957/ 177717-177717 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Hidehiro Ishizawa, Yosuke Tashiro, Takashi Okada, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata [Notes] 考察の一部を担当
[15]. High throughput apparatus for testing of silicon nitride membranes used in preparation of samples for atmospheric scanning electron microscopy
IEEE Xplore Conference / - (2024) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Kretkowski Maciej, Hiroyuki Futamata, Wataru Inami, Yoshimasa Kawata [Notes] 考察の一部を担当
[16]. Pyocianin stimulates membrane vesicle formation in Pseudomonas aerugnosa, but the synthesis is not required for enhanced vesiculation in biofilms
The Microbe /2024 - (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] So Ueno, Mizuki Kanno, Shakhina Zaman Sharan, Hiroyuki Futamata, Yosuke Tashiro [Notes] 考察の一部を担当
[17]. Pyocianin stimulates membrane vesicle formation in Pseudomonas aerugnosa, but the synthesis is not required for enhanced vesiculation in biofilms
The Microbe 4/2024 - 100137 (2024) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] So Ueno, Mizuki Kanno, Shakhina Zaman Sharan, Hiroyuki Futamata, Yosuke Tashiro [Notes] Biofilmとplacktonic cellsに関する考察
[DOI]
[18]. Pyocianin stimulates membrane vesicle formation in Pseudomonas aerugnosa, but the synthesis is not required for enhanced vesiculation in biofilms
The Microbe /2024 - (2024) [Refereed] refereed
[Lead author or co-author]
[Author] So Ueno, Mizuki Kanno, Shakhina Zaman Sharan, Hiroyuki Futamata, Yosuke Tashiro
[19]. Construction of a microbial methanation system and evaluation of air contamination effects
Geosci. Repts. Shizuoka Univ. / 45-56 (2024) [Refereed] refereed
[Lead author or co-author]
[Author] 池浦康平, 川野誠, 寺尾美菜子, 市川幸太, 二又裕之, 木村浩之
[20]. Biofilm-derived membrane vesicles exhibit potent immunomodulatory activity in Pseudomonas aeruginosa PAO1.
Microbiology and immunology 68/7 224-236 (2024) [Refereed] refereed
[Lead author or co-author]
[Author] Minato Takahara, Satoru Hirayama, Hiroyuki Futamata, Ryoma Nakao, Yosuke Tashiro
[21]. Construction of a microbial methanation system and evaluation of air contamination effects
Geosci. Repts. Shizuoka Univ. 51/ 45-56 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] 池浦康平、川野誠、寺尾美菜子、市川幸太、二又裕之、木村浩之 [Notes] 実験操作および考察の一部
[22]. Construction of a microbial methanation system and evaluation of air contamination effects
Geosci. Repts. Shizuoka Univ. / 45-56 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] 池浦康平, 川野誠, 寺尾美菜子, 市川幸太, 二又裕之, 木村浩之 [Notes] 考察の一部を担当
[23]. Biofilm-derived membrane vesicles exhibit potent immunomodulatory activity in Pseudomonas aeruginosa PAO1.
Microbiology and immunology 68/7 224-236 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Minato Takahara, Satoru Hirayama, Hiroyuki Futamata, Ryoma Nakao, Yosuke Tashiro [Notes] 考察の一部を担当
[24]. Complete genome sequences of six duckweed-associated bacterial strains for studying community assembly in synthetic plant microbiome.
Microbial Resource Announcement 1/ - e0128023 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa*, Minami Tada, Yosuke Tashiro, Masashi Kuroda, Daisuke Inoue, Hideo Dohra, Hiroyuki Futamata, and Michihiko Ike [Notes] 微生物の生存に関する部分
[DOI]
[25]. Complete genome sequences of six duckweed-associated bacterial strains for studying community assembly in synthetic plant microbiome.
Microbiology resource announcements 13/4 e0128023- (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Minami Tada, Yosuke Tashiro, Masashi Kuroda, Daisuke Inoue, Hideo Dohra, Hiroyuki Futamata, Michihiko Ike [URL]
[26]. Complete genome sequences of six duckweed-associated bacterial strains for studying community assembly in synthetic plant microbiome.
Microbiology resource announcements 13/4 e0128023- (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa, Minami Tada, Yosuke Tashiro, Masashi Kuroda, Daisuke Inoue, Hideo Dohra, Hiroyuki Futamata, Michihiko Ike [Notes] 考察の一部を担当
[URL]
[27]. Stable states of microbial community are formed by dynamic metabolic networks with members functioning as both robustness and plasticity
Microbes and Environments 39/1 - ME23091 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Masahiro Honjo, Kenshi Suzuki, Junya Katai, Yosuke Tashiro, Tomo Aoyagi, Tomoyuki Hori, Takashi Okada, Yasuhisa Saito, and Hiroyuki Futamata
[28]. Learning beyond-pairwise interactions enables the bottom-up prediction of microbial community structure.
Proceedings of the National Academy of Sciences of the United States of America 121/7 e2312396121- (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Yosuke Tashiro, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata [URL]
[29]. Learning beyond-pairwise interactions enables the bottom-up prediction of microbial community structure.
Proceedings of the National Academy of Sciences of the United States of America 121/7 e2312396121- (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Yosuke Tashiro, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata [URL]
[30]. Learning beyond-pairwise interactions enables the bottom-up prediction of microbial community structure
Proc. Natl. Acad. Sci. USA / - e2312396121 (2024) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa, Yosuke Tashiro, Daisuke Inoue, Michihiko Ike, Hiroyuki Futamata [Notes] 緒言とディスカッションの一部
[DOI]
[31]. Stable States of a Microbial Community Are Formed by Dynamic Metabolic Networks with Members Functioning to Achieve Both Robustness and Plasticity.
Microbes and environments 39/1 n/a-n/a (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Masahiro Honjo, Kenshi Suzuki, Junya Katai, Yosuke Tashiro, Tomo Aoyagi, Tomoyuki Hori, Takashi Okada, Yasuhisa Saito, Hiroyuki Futamata [URL]
[32]. Stable States of a Microbial Community Are Formed by Dynamic Metabolic Networks with Members Functioning to Achieve Both Robustness and Plasticity.
Microbes and environments 39/1 n/a-n/a (2024) [Refereed] non-refereed
[Lead author or co-author]
[Author] Masahiro Honjo, Kenshi Suzuki, Junya Katai, Yosuke Tashiro, Tomo Aoyagi, Tomoyuki Hori, Takashi Okada, Yasuhisa Saito, Hiroyuki Futamata [URL]
[33]. Microbially produced fertilizer provides rhizobacteria to hydroponic tomato roots by forming beneficial biofilms.
Applied microbiology and biotechnology 107/23 7365-7374 (2023) [Refereed] refereed
[Lead author or co-author]
[Author] Yuya Sato, Teruhiko Miwa, Tomohiro Inaba, Takuto Akachi, Eiji Tanaka, Tomoyuki Hori, Keita Murofushi, Hiroshi Takagi, Hiroyuki Futamata, Tomo Aoyagi, Hiroshi Habe
[34]. Microbially produced fertilizer provides rhizobacteria to hydroponic tomato roots by forming beneficial biofilms.
Applied microbiology and biotechnology 107/23 7365-7374 (2023) [Refereed] refereed
[Lead author or co-author]
[Author] Yuya Sato, Teruhiko Miwa, Tomohiro Inaba, Takuto Akachi, Eiji Tanaka, Tomoyuki Hori, Keita Murofushi, Hiroshi Takagi, Hiroyuki Futamata, Tomo Aoyagi, Hiroshi Habe
[35]. Microbially produced fertilizer provides rhizobacteria to hydroponic tomato roots by forming benefical biofilms
Appl. Microbiol. Biotech 107/23 7365-7374 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Yuya Sato, Teruhiko Miwa, Tomohiro Inaba, Takuto Akachi, Eiji Tanaka, Tomoyuki Hori, Keita Murofushi, Hiroshi Takagi, Hiroyuki Futamata, Tomo Aoyagi, Hiroshi Habe [Notes] リアクターの運転について。微生物群集解析
[DOI]
[36]. Identification of genes involved in enhanced membrane vesicle formation in Pseudomonas aeruginosa biofilms: Surface sensing facilitates vesiculation
Frontiers in Microbiology Dec 1/14 - 1252155 (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Mizuki Kanno, Takuya Shiota, So Ueno, Minato Takahara, Keisuke Haneda, Yuhei O Tahara, Masaki Shintani, Ryoma Nakao, Makoto Miyata, Kazuhide Kimbara, Hiroyuki Futamata, Yosuke Tashiro [Notes] 微生物培養に関して
[DOI]
[37]. Rechargeable Biomineral Induced by Sulfate-reducing Bacterium Cupidesulfovibrio sp. Strain HK-II
bioRxiv / - (2023) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Yui Arashi, Hiroki Mochihara, Hiroko Kubota, Kei Suzuki, Yusuke Chiba, Yutaka Kato, Toshihiro Kogure, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, and Hiroyuki Futamata [Notes] ほぼ全般
[DOI]
[38]. Rechargeable Biomineral Induced by Sulfate-reducing Bacterium Cupidesulfovibrio sp. Strain HK-II
bioRxiv / - (2023) [Refereed] refereed
[Lead author or co-author]
[Author] Yui Arashi, Hiroki Mochihara, Hiroko Kubota, Kei Suzuki, Yusuke Chiba, Yutaka Kato, Toshihiro Kogure, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, Hiroyuki Futamata
[39]. Rechargeable Biomineral Induced by Sulfate-reducing Bacterium Cupidesulfovibrio sp. Strain HK-II
bioRxiv / - (2023) [Refereed] refereed
[Lead author or co-author]
[Author] Yui Arashi, Hiroki Mochihara, Hiroko Kubota, Kei Suzuki, Yusuke Chiba, Yutaka Kato, Toshihiro Kogure, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, Hiroyuki Futamata
[40]. Identification of genes involved in enhanced membrane vesicle formation in Pseudomonas aeruginosa biofilms: surface sensing facilitates vesiculation.
Frontiers in microbiology 14/ 1252155-1252155 (2023) [Refereed] non-refereed
[Lead author or co-author]
[Author] Mizuki Kanno, Takuya Shiota, So Ueno, Minato Takahara, Keisuke Haneda, Yuhei O Tahara, Masaki Shintani, Ryoma Nakao, Makoto Miyata, Kazuhide Kimbara, Hiroyuki Futamata, Yosuke Tashiro
[41]. Identification of genes involved in enhanced membrane vesicle formation in Pseudomonas aeruginosa biofilms: surface sensing facilitates vesiculation.
Frontiers in microbiology 14/ 1252155-1252155 (2023) [Refereed] non-refereed
[Lead author or co-author]
[Author] Mizuki Kanno, Takuya Shiota, So Ueno, Minato Takahara, Keisuke Haneda, Yuhei O Tahara, Masaki Shintani, Ryoma Nakao, Makoto Miyata, Kazuhide Kimbara, Hiroyuki Futamata, Yosuke Tashiro
[42]. Metabolic Pathway of Phenol Degradation of a Cold-Adapted Antarctic Bacteria, Arthrobacter sp.
Catalysts 12/11 - (2022) [Refereed] non-refereed
[Lead author or co-author]
[Author] Gillian Li Yin Lee, Nur Nadhirah Zakaria, Hiroyuki Futamata, Kenshi Suzuki, Azham Zulkharnain, Noor Azmi Shaharuddin, Peter Convey, Khadijah Nabilah Mohd Zahri, Siti Aqlima Ahmad
[43]. Metabolic Pathway of Phenol Degradation of a Cold-Adapted Antarctic Bacteria, Arthrobacter sp.
Catalysts 12/11 - (2022) [Refereed] non-refereed
[Lead author or co-author]
[Author] Gillian Li Yin Lee, Nur Nadhirah Zakaria, Hiroyuki Futamata, Kenshi Suzuki, Azham Zulkharnain, Noor Azmi Shaharuddin, Peter Convey, Khadijah Nabilah Mohd Zahri, Siti Aqlima Ahmad
[44]. Hitherto-Unnoticed Self-Transmissible Plasmids Widely Distributed among Different Environments in Japan.
Applied and environmental microbiology 88/18 e0111422- (2022) [Refereed] non-refereed
[Lead author or co-author]
[Author] Masaya Hayakawa, Maho Tokuda, Kensei Kaneko, Koichiro Nakamichi, Yukie Yamamoto, Tatsuya Kamijo, Honoka Umeki, Reimi Chiba, Ryo Yamada, Mitsuya Mori, Kosuke Yanagiya, Ryota Moriuchi, Masahiro Yuki, Hideo Dohra, Hiroyuki Futamata, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
[45]. Hitherto-Unnoticed Self-Transmissible Plasmids Widely Distributed among Different Environments in Japan.
Applied and environmental microbiology 88/18 e0111422- (2022) [Refereed] non-refereed
[Lead author or co-author]
[Author] Masaya Hayakawa, Maho Tokuda, Kensei Kaneko, Koichiro Nakamichi, Yukie Yamamoto, Tatsuya Kamijo, Honoka Umeki, Reimi Chiba, Ryo Yamada, Mitsuya Mori, Kosuke Yanagiya, Ryota Moriuchi, Masahiro Yuki, Hideo Dohra, Hiroyuki Futamata, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
[46]. A long time unnoticed-self-transmissible plasmids widely distributed among different environments in Japan
Applied and Environmental Microbiology / - (2022) [Refereed] refereed
[Lead author or co-author]
[Author] Masaya Hayakawa, Maho Tokuda, Kensei Kaneko, Koichiro Nakamichi, Yukie Yamamoto, Tatsuya Kamijo, Honoka Umeki, Ryo Yamada, Mitsuya Mori, Kosuke Yanagiya, Ryota Moriuchi, Masahiro Yuki, Hideo Dohra, Hiroyuki Futamata, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
[47]. A long time unnoticed-self-transmissible plasmids widely distributed among different environments in Japan
Applied and Environmental Microbiology / - aem.01114-22 (2022) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Masaya Hayakawa, Maho Tokuda, Kensei Kaneko, Koichiro Nakamichi, Yukie Yamamoto, Tatsuya Kamijo, Honoka Umeki, Ryo Yamada, Mitsuya Mori, Kosuke Yanagiya, Ryota Moriuchi, Masahiro Yuki, Hideo Dohra, Hiroyuki Futamata, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani [Notes] A part of Introduction and Discussion
[48]. A long time unnoticed-self-transmissible plasmids widely distributed among different environments in Japan
Applied and Environmental Microbiology / - (2022) [Refereed] refereed
[Lead author or co-author]
[Author] Masaya Hayakawa, Maho Tokuda, Kensei Kaneko, Koichiro Nakamichi, Yukie Yamamoto, Tatsuya Kamijo, Honoka Umeki, Ryo Yamada, Mitsuya Mori, Kosuke Yanagiya, Ryota Moriuchi, Masahiro Yuki, Hideo Dohra, Hiroyuki Futamata, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
[49]. 複合微生物系の好適制御に向けた共存機構の理解
生物工学会誌 12/12 617-620 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] 二又裕之 [URL]
[50]. Imbalance in carbon and nitrogen metabolism in Comamonas testosteroni R2 is caused by negative feedback and rescued by L-arginine
Microbes and Environments 36/4 - Article ME21050 (2021) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Abd Rahman Jabir Mohd Din, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Hidehiro Ishizawa, Motohiko Kimura, Yosuke Tashiro, and Hiroyuki Futamata [Notes] 緒言、結果、考察の一部
[DOI]
[51]. Incorporation of plasmid DNA into bacterial membrane vesicles by peptidoglycan defects in Escherichia coli
Frontiers in Microbiology 12/ - Article 747606 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Sharmin Aktar, Yuhi Okamoto, So Ueno, Yuhei O Tahara, Masayoshi Imaizumi, Masaki Shintani, Makoto Miyata, Hiroyuki Futamata, Hideaki Nojiri, and Yosuke Tashiro [Notes] 方法と結果の一部
[DOI]
[52].
SEIBUTSU-KOGAKU KAISHI 12/ 617-620 (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] 二又裕之 [DOI]
[53]. 複合微生物系の好適制御に向けた共存機構の理解
生物工学会誌 12/12 617-620 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] 二又裕之 [URL]
[54]. Efficient conversion of organic nitrogenous wastewater to nitrate solution driven by comammox Nitrospira.
Water research 197/ 117088-117088 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] Yuya Sato, Eiji Tanaka, Tomoyuki Hori, Hiroyuki Futamata, Keita Murofushi, Hiroshi Takagi, Takuto Akachi, Teruhiko Miwa, Tomohiro Inaba, Tomo Aoyagi, Hiroshi Habe
[55]. Effect of fly ash amendment on sandy soil properties and peanut yields
ScienceAsia 47/ 357-365 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] Thien V. Le, Chau N. T. Ngo, Hiroyuki Futamata
[56]. Effect of fly ash amendment on sandy soil properties and peanut yields
ScienceAsia 47/ 357-365 (2021) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Thien V. Le, Chau N. T. Ngo, and Hiroyuki Futamata [Notes] 分析結果と考察の一部
[57]. Efficient conversion of organic nitrogenous wastewater to nitrate solution driven by comammox Nitrospira.
Water research 197/ 117088-117088 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] Yuya Sato, Eiji Tanaka, Tomoyuki Hori, Hiroyuki Futamata, Keita Murofushi, Hiroshi Takagi, Takuto Akachi, Teruhiko Miwa, Tomohiro Inaba, Tomo Aoyagi, Hiroshi Habe
[58]. Effect of fly ash amendment on sandy soil properties and peanut yields
ScienceAsia 47/ 357-365 (2021) [Refereed] refereed
[Lead author or co-author]
[Author] Thien V. Le, Chau N. T. Ngo, Hiroyuki Futamata
[59]. Complete Genome Sequence of Buttiauxella agrestis DSM 9389.
Microbiology resource announcements 10/19 - (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Nao Nakamichi, Ryota Moriuchi, Hideo Dohra, Hiroyuki Futamata, Yosuke Tashiro
[60]. Complete Genome Sequence of Buttiauxella agrestis DSM 9389.
Microbiology resource announcements 10/19 - (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Nao Nakamichi, Ryota Moriuchi, Hideo Dohra, Hiroyuki Futamata, Yosuke Tashiro
[61]. Complete genome sequence of Buttiauxella agrestis DSM 9389
Microbiology Resource Announcement / - (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Nao Nakamichi, Ryota Moriuchi, Hideo Dohra, Hiroyuki Futamata, Yosuke Tashiro [Notes] 微生物特性に関する部分
[DOI]
[62]. Incorporation of Plasmid DNA Into Bacterial Membrane Vesicles by Peptidoglycan Defects in Escherichia coli.
Frontiers in microbiology 12/ 747606-747606 (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Sharmin Aktar, Yuhi Okamoto, So Ueno, Yuhei O Tahara, Masayoshi Imaizumi, Masaki Shintani, Makoto Miyata, Hiroyuki Futamata, Hideaki Nojiri, Yosuke Tashiro
[63]. Imbalance in Carbon and Nitrogen Metabolism in Comamonas testosteroni R2 Is Caused by Negative Feedback and Rescued by L-arginine.
Microbes and environments 36/4 n/a-n/a (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Abd Rahman Jabir Mohd Din, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Hidehiro Ishizawa, Motohiko Kimura, Yosuke Tashiro, Hiroyuki Futamata [URL]
[64]. Incorporation of Plasmid DNA Into Bacterial Membrane Vesicles by Peptidoglycan Defects in Escherichia coli.
Frontiers in microbiology 12/ 747606-747606 (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Sharmin Aktar, Yuhi Okamoto, So Ueno, Yuhei O Tahara, Masayoshi Imaizumi, Masaki Shintani, Makoto Miyata, Hiroyuki Futamata, Hideaki Nojiri, Yosuke Tashiro
[65]. Imbalance in Carbon and Nitrogen Metabolism in Comamonas testosteroni R2 Is Caused by Negative Feedback and Rescued by L-arginine.
Microbes and environments 36/4 n/a-n/a (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Abd Rahman Jabir Mohd Din, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Hidehiro Ishizawa, Motohiko Kimura, Yosuke Tashiro, Hiroyuki Futamata [URL]
[66]. Coexisting mechanisms of bacterial community are changeable even under similar stable conditions in a chemostat culture.
Journal of bioscience and bioengineering 131/1 77-83 (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Abd Rahman Jabir Bin Mohd Din, Yosuke Tashiro, Hiroyuki Futamata
[67]. Coexisting mechanisms of bacterial community are changeable even under similar stable conditions in a chemostat culture.
Journal of bioscience and bioengineering 131/1 77-83 (2021) [Refereed] non-refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Abd Rahman Jabir Bin Mohd Din, Yosuke Tashiro, Hiroyuki Futamata
[68]. Coexisting mechanisms of bacterial community are changeable even under similar stable conditions in a chemostat culture
131/1 77-83 (2021) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Fatma Azwani Abdul Aziz, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Abd Rahman Jabir Bin Mohd Din, Yosuke Tashiro, Hiroyuki Futamata [Notes] IntroductionとDiscussionの一部
[URL]
[69]. Efficient conversion of organic nitrogenous wastewater ot nitrate solution driven by comamox Nitrospira.
Water Research 197/ 117088- (2021) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] 7. Yuya Sato, Eiji Tanaka, Tomoyuki Hori, Hiroyuki Futamata, Keita Murofushi, Hiroshi Takagi, Takuto Akachi, Teruhiko Miwa, Tomohiro Inaba, Tomo Aoyagi, and Hiroshi Habe [Notes] 方法、結果、考察の一部
[DOI]
[70]. Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07.
International journal of molecular sciences 21/24 - (2020) [Refereed] non-refereed
[Lead author or co-author]
[Author] Gillian Li Yin Lee, Nur Nadhirah Zakaria, Peter Convey, Hiroyuki Futamata, Azham Zulkharnain, Kenshi Suzuki, Khalilah Abdul Khalil, Noor Azmi Shaharuddin, Siti Aisyah Alias, Gerardo González-Rocha, Siti Aqlima Ahmad
[71]. Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07.
International journal of molecular sciences 21/24 - (2020) [Refereed] non-refereed
[Lead author or co-author]
[Author] Gillian Li Yin Lee, Nur Nadhirah Zakaria, Peter Convey, Hiroyuki Futamata, Azham Zulkharnain, Kenshi Suzuki, Khalilah Abdul Khalil, Noor Azmi Shaharuddin, Siti Aisyah Alias, Gerardo González-Rocha, Siti Aqlima Ahmad
[72]. Synthetic Bacterial Community of Duckweed: A Simple and Stable System to Study Plant-microbe Interactions.
Microbes and environments 35/4 Article ME20112-Article ME20112 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Minami Tada, Masashi Kuroda, Daisuke Inoue, Hiroyuki Futamata, Michihiko Ike [URL]
[73]. Synthetic Bacterial Community of Duckweed: A Simple and Stable System to Study Plant-microbe Interactions.
Microbes and environments 35/4 Article ME20112-Article ME20112 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Hidehiro Ishizawa, Minami Tada, Masashi Kuroda, Daisuke Inoue, Hiroyuki Futamata, Michihiko Ike [URL]
[74]. A simple and stable system to study plant-microbe interactions
Microbes and Environments 35/4 Article ME20112-Article ME20112 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Hidehiro Ishizawa&Minami Tada&Masashi Kuroda&Daisuke Inoue&Hiroyuki Futamata&Michihiko Ike [Notes] IntroductionとDiscussionの一部
[DOI]
[75]. Statistical optimization of phenol degradation and pathway identification through whole genome sequencing of the cold-adapted Antarctic bacterium, Rhodococcus sp. strain AQ5-07
Int. J. Mol. Sci. 21/24 9369- (2020) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Lee, GLY&NN Zakaria&P. Convey&H. Futamata&A. Zulkharnain&K. Suzuki&KA Khalil&NA Shaharuddin&SA, Alias&G. Gonzalez-Rocha&SA. Ahamad [Notes] ResultとDiscussionの一部
[DOI]
[76]. Multilamellar and multivesicular outer membrane vesicles produced by a Buttiauxella agrestis tolB mutant
Appl. Environ. Microbiol. 86/20 e01131-20 (2020) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Takaki K&Tahara YO&Nakamichi N&Hasegawa Y&Shintani M&Ohkuma M&Miyata M&Futamata H&Tashiro Y. [Notes] イントロと考察の一部を担当
[DOI]
[77]. Multilamellar and Multivesicular Outer Membrane Vesicles Produced by a Buttiauxella agrestis tolB Mutant.
Applied and environmental microbiology 86/20 - (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Kotaro Takaki, Yuhei O Tahara, Nao Nakamichi, Yusuke Hasegawa, Masaki Shintani, Moriya Ohkuma, Makoto Miyata, Hiroyuki Futamata, Yosuke Tashiro
[78]. Multilamellar and Multivesicular Outer Membrane Vesicles Produced by a Buttiauxella agrestis tolB Mutant.
Applied and environmental microbiology 86/20 - (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Kotaro Takaki, Yuhei O Tahara, Nao Nakamichi, Yusuke Hasegawa, Masaki Shintani, Moriya Ohkuma, Makoto Miyata, Hiroyuki Futamata, Yosuke Tashiro
[79]. Draft genome sequence of phenol-degrading Variovorax boronicumulans strain c24
Microbiology Resource Announcements 9/37 e00597-20 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz&Kenshi Suzuki&Koki Amano&Ryota Moriuchi&Hideo Dohra&Yosuke Tashiro&Hiroyuki Futamata
[80]. Draft genome sequence of phenol-degrading Variovorax boronicumulans strain c24
Microbiology Resource Announcements 9/37 e00597-20 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz&Kenshi Suzuki&Koki Amano&Ryota Moriuchi&Hideo Dohra&Yosuke Tashiro&Hiroyuki Futamata
[81]. Draft genome sequence of phenol-degrading Variovorax boronicumulans strain c24
Microbiology Resource Announcements 9/37 e00597-20 (2020) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Fatma Azwani Abdul Aziz&Kenshi Suzuki&Koki Amano&Ryota Moriuchi&Hideo Dohra&Yosuke Tashiro&Hiroyuki Futamata [Notes] IntroductionとDiscussion部分の一部
[DOI]
[82]. Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain HAB-30.
Microbiology resource announcements 9/7 e01478-19 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz, Kenshi Suzuki, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, Hiroyuki Futamata
[83]. Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain HAB-30.
Microbiology resource announcements 9/7 e01478-19 (2020) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani Abdul Aziz, Kenshi Suzuki, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, Hiroyuki Futamata
[84]. Draft genome sequence of phenol-degrading Variovorax boronicumulans strain HAB-30
Microbiology Resource Announcements 9/7 e01478-19 (2020) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Fatma Azwani, Kenshi Suzuki, Ryota Moriuchi, Hideo Dohra, Yosuke Tashiro, Hiroyuki Futamata [Notes] Discussion該当部分の一部
[DOI]
[85]. Properties of fly ashes from thermal power stations in relation to use as soil amendments.
Sains Malasysiana 48/4 745-755 (2019) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Le Van Thien*, Ngo Thi Tuong Chau, Le Thi Tham Hong, Nguyen Thu Trang, Hiroyuki Futamata [Notes] 微生物群集解析に係る部分
[86]. Targeted delivery using membrane vesicles in prokaryotes.
Biophys. Physicobiol. 16/ 114-120 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Yosuke Tashiro*, Kotaro Takaki, Hiroyuki Futamata [Notes] 微生物の培養、考察の一部
[DOI]
[87]. Targeted delivery using membrane vesicles in prokaryotes
Physics and Physicobiology 16/Apr. 19 114-120 (2019) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Yosuke Tashiro*, Kotaro Takaki, Hiroyuki Futamata [Notes] Discussionの一部
[DOI]
[88]. Targeted delivery using membrane vesicles in prokaryotes.
Biophys. Physicobiol. 16/Apr. 19 114-120 (2019) [Refereed] refereed
[Lead author or co-author]
[Author] Yosuke Tashiro, Kotaro Takaki, Hiroyuki Futamata
[89]. Properties of fly ashes from thermal power stations in relation to use as soil amendments.
Sains Malasysiana 48/4 745-755 (2019) [Refereed] refereed
[Lead author or co-author]
[Author] Le Van Thien, Ngo Thi Tuong Chau, Le Thi Tham Hong, Nguyen Thu Trang, Hiroyuki Futamata
[90]. Targeted delivery using membrane vesicles in prokaryotes.
Biophys. Physicobiol. 16/Apr. 19 114-120 (2019) [Refereed] refereed
[Lead author or co-author]
[Author] Yosuke Tashiro, Kotaro Takaki, Hiroyuki Futamata
[91]. Properties of fly ashes from thermal power stations in relation to use as soil amendments.
Sains Malasysiana 48/4 745-755 (2019) [Refereed] refereed
[Lead author or co-author]
[Author] Le Van Thien, Ngo Thi Tuong Chau, Le Thi Tham Hong, Nguyen Thu Trang, Hiroyuki Futamata
[92]. 生態,生理・構造,遺伝・ゲノミクス・バイオテクノロジー 緑膿菌の膜小胞分泌におけるカルジオリピンの機能(Function of cardiolipin in membrane vesicle secretion by Pseudomonas aeruginosa)
日本細菌学雑誌 74/1 38-38 (2019) [Refereed] non-refereed
[Lead author or co-author]
[Author] 田代 陽介, 塩田 拓也, 三浦 わかな, 新谷 政己, 金原 和秀, 二又 裕之
[93]. 生態,生理・構造,遺伝・ゲノミクス・バイオテクノロジー 緑膿菌の膜小胞分泌におけるカルジオリピンの機能(Function of cardiolipin in membrane vesicle secretion by Pseudomonas aeruginosa)
日本細菌学雑誌 74/1 38-38 (2019) [Refereed] non-refereed
[Lead author or co-author]
[Author] 田代 陽介, 塩田 拓也, 三浦 わかな, 新谷 政己, 金原 和秀, 二又 裕之
[94]. Utilization of compost tea for biochemical response assessment associated with resistance to phytopathogen causing leaf spot in Melicope ptelefolia
Organic Agriculture / - (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Abd Rahaman Jabir, Mohd Din, Siti Zulaiha Hanapi, Hiroyuki Futamata, Mohamad roji Sarmidi
[95]. Draft genome sequence of the phenol-degrading bacterium Cupriavidus sp. P-10 isolated from trichloroethene-contaminated aquifer soil
Microbiology Resource Announcement 7/18 - (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Kenshi Suzuki, Fatma A. A. Azizi, Masahiro Honjo, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Kensei Masuda, Ayaka Minoura, Yuki Kudo, Yosuke Tashiro, Hiroyuki Futamata
[96]. Effect of using thermophilic bacteria as start inoculum on microbial aspect of pulp and paper mill sludge compositing process
Chiang Mai J. Sci. 45/ 1-14 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Ngo Thi Tuong Chau, Le Van Thien, Le Thi Tham Hong, Hiroyuki Futamata
[97]. Effect of using thermophilic bacteria as start inoculum on microbial aspect of pulp and paper mill sludge compositing process
Chiang Mai J. Sci. 45/ 1-14 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Ngo Thi Tuong Chau, Le Van Thien, Le Thi Tham Hong, and Hiroyuki Futamata [Notes] 微生物群集構造の解析および考察
[98]. Draft genome sequence of the phenol-degrading bacterium Cupriavidus sp. P-10 isolated from trichloroethene-contaminated aquifer soil
Microbiology Resource Announcement 7/18 - (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] Kenshi Suzuki, Fatma A. A. Azizi, Masahiro Honjo, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Kensei Masuda, Ayaka Minoura, Yuki Kudo, Yosuke Tashiro, and Hiroyuki Futamata [DOI]
[99]. Utilization of compost tea for biochemical response assessment associated with resistance to phytopathogen causing leaf spot in Melicope ptelefolia
Organic Agriculture / - (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Abd Rahaman Jabir Mohd Din, Siti Zulaiha Hanapi, Hiroyuki Futamata, and Mohamad roji Sarmidi [Notes] データ考察
[DOI]
[100]. Utilization of compost tea for biochemical response assessment associated with resistance to phytopathogen causing leaf spot in Melicope ptelefolia
Organic Agriculture / - (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Abd Rahaman Jabir, Mohd Din, Siti Zulaiha Hanapi, Hiroyuki Futamata, Mohamad roji Sarmidi
[101]. Draft genome sequence of the phenol-degrading bacterium Cupriavidus sp. P-10 isolated from trichloroethene-contaminated aquifer soil
Microbiology Resource Announcement 7/18 - (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Kenshi Suzuki, Fatma A. A. Azizi, Masahiro Honjo, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Kensei Masuda, Ayaka Minoura, Yuki Kudo, Yosuke Tashiro, Hiroyuki Futamata
[102]. Effect of using thermophilic bacteria as start inoculum on microbial aspect of pulp and paper mill sludge compositing process
Chiang Mai J. Sci. 45/ 1-14 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Ngo Thi Tuong Chau, Le Van Thien, Le Thi Tham Hong, Hiroyuki Futamata
[103]. Characterization and utilization of pulp and paper mill sludge digesting thermophilic bacteria in composting process
Sains Malaysiana 47/5 1051-1060 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Ngo Thi Tuong Chau, Le Van Thien, Pham Thi Ngoc Lan, Hiroyuki Futamata
[104]. Bacterial communities adapted to higher external resistance can reduce the onset potential of anode in microbial fuel cells
Journal of Bioscience and Bioengineering 125/5 565-571 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Kei Suzuki, Yutaka Kato, Arashi Yui, Shuji Yamamoto, Syota Ando, Owen Rubaba, Yosuke Tashiro, Hiroyuki Futamata
[105]. Bacterial communities adapted to higher external resistance can reduce the onset potential of anode in microbial fuel cells
Journal of Bioscience and Bioengineering (vol)/(num) (xxx) - (zzz) (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Hiroyuki Futamata [共著者]Kei Suzuki & Yutaka Kato & Shuji Yamamoto & Owen Rubaba & Hiroki Mochihara & Takuya Hosokawa & Hiroko Kubota & Arashi Yui & Yosuke Tashiro [Notes] IntroductionおよびDiscussion、Resultsの一部を担当
[106]. Characterization and utilization of pulp and paper mill sludge digesting thermophilic bacteria in compositing process
Sains Malaysiana 47/5 1051-1060 (2018) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] co-author
[Author] Chau Ngo, Van Thien Le, Ngoc Lan Pham Thi, and Hiroyuki Futamata [Notes] 微生物群集構造の解析に関する部分
[107]. Characterization and utilization of pulp and paper mill sludge digesting thermophilic bacteria in composting process
Sains Malaysiana 47/5 1051-1060 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Ngo Thi Tuong Chau, Le Van Thien, Pham Thi Ngoc Lan, Hiroyuki Futamata
[108]. Bacterial communities adapted to higher external resistance can reduce the onset potential of anode in microbial fuel cells
Journal of Bioscience and Bioengineering 125/5 565-571 (2018) [Refereed] refereed
[Lead author or co-author]
[Author] Kei Suzuki, Yutaka Kato, Arashi Yui, Shuji Yamamoto, Syota Ando, Owen Rubaba, Yosuke Tashiro, Hiroyuki Futamata
[109]. Draft Genome Sequence of Comamonas testosteroni R2 Consist of Aromatic Compound Degradation Genes for Phenol Hydroxylase
Genome Announcements 5/36 e00875-17- (2017) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Fatma Azwani & Hiroyuki Futamata [共著者]Kenshi Suzuki & Masahiro Honjyo & Yosuke Tashiro
[110].
(vol)/(num) (xxx) - (zzz) (2017) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]鈴木研志、Fatma Azwani Abdul Aziz [Notes] 結果と考察の一部
[111]. 微生物生態系の理解に向けた挑戦 〜微生物を用いた環境浄化の取り組みを緒として〜
日本土壌微生物学会誌 (vol)/(num) (xxx)-(zzz) (2017) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, 二又 裕之, 共著者, 鈴木研志, Fatma Azwani, Abdul Aziz
[112]. 微生物生態系の理解に向けた挑戦 〜微生物を用いた環境浄化の取り組みを緒として〜
日本土壌微生物学会誌 (vol)/(num) (xxx)-(zzz) (2017) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, 二又 裕之, 共著者, 鈴木研志, Fatma Azwani, Abdul Aziz
[113]. Interaction of bacterial membrane vesicles with specific species and their potential for delivery to target cells
Frontiers in Microbiology (vol)/(num) (xxx)-(zzz) (2017) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, Yosuke Tashiro, 共著者]Yusuke, Hasegawa$Masaki Shintani$Kotaro, Takaki$Moriya Ohkuma$Kazuhide Kimbara$Hiroyuki Futamata
[114]. Interaction of bacterial membrane vesicles with specific species and their potential for delivery to target cells
Frontiers in Microbiology (vol)/(num) (xxx)-(zzz) (2017) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, Yosuke Tashiro, 共著者]Yusuke, Hasegawa$Masaki Shintani$Kotaro, Takaki$Moriya Ohkuma$Kazuhide Kimbara$Hiroyuki Futamata
[115]. Interaction of bacterial membrane vesicles with specific species and their potential for delivery to target cells
Frontiers in Microbiology (vol)/(num) (xxx) - (zzz) (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yosuke Tashiro [共著者]Yusuke Hasegawa$Masaki Shintani$Kotaro Takaki$Moriya Ohkuma$Kazuhide Kimbara$Hiroyuki Futamata [Notes] 結果の一部、考察の一部
[116]. Generation of small colony variants in biofilms by Escherichia coli harboring a conjugative F plasmid
Microbes and Environments (vol)/(num) (xxx) - (zzz) (2017) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yosuke Tashiro [共著者]Hiroaki Eida$Satoshi Ishii$Hiroyuki Futamata$Satoshi Okabe [Notes] 結果と考察の一部
[117]. Generation of Small Colony Variants in Biofilms by Escherichia coli Harboring a Conjugative F Plasmid
MICROBES AND ENVIRONMENTS 32/1 40-46 (2017) [Refereed] refereed
[Lead author or co-author]
[Author] Yosuke Tashiro, Hiroaki Eida, Satoshi Ishii, Hiroyuki Futamata, Satoshi Okabe
[118]. Draft genome sequence of Comamonas testosteroni R2, consisting of aromatic compound degradation genes for phenol hydroxylase
Genome Announcements 5/36 e00875-17 (2017) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani, Kenshi Suzuki, Masahiro Honjyo, Yosuke Tashiro, Hiroyuki Futamata
[119]. Generation of Small Colony Variants in Biofilms by Escherichia coli Harboring a Conjugative F Plasmid
MICROBES AND ENVIRONMENTS 32/1 40-46 (2017) [Refereed] refereed
[Lead author or co-author]
[Author] Yosuke Tashiro, Hiroaki Eida, Satoshi Ishii, Hiroyuki Futamata, Satoshi Okabe
[120]. Draft genome sequence of Comamonas testosteroni R2, consisting of aromatic compound degradation genes for phenol hydroxylase
Genome Announcements 5/36 e00875-17 (2017) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma Azwani, Kenshi Suzuki, Masahiro Honjyo, Yosuke Tashiro, Hiroyuki Futamata
[121]. Editorial: Development of microbial ecological theory: stability, plasticity and evolution of microbial ecosystems
Frontiers in Microbiology (vol)/(num) (xxx) - (zzz) (2016) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Shin Haruta [共著者]Hiroyuki Futamata,Yasuhisa Saito [Notes] 微生物生態系の挙動解析と共存機構解明に向けた展望
[122]. Draft genome sequence of Pseudomonas sp. LAB-08 isolated from trichloroethene contaminated aquifer soil
Genome Announcements 4/5 e00948- 16 (2016) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]Kenshi Suzuki,Fatma AA Aziz,Yuma Inuzuka,Yosuke Tashiro [Notes] ほぼ全文を担当
[123]. Comparison of electrochemical and microbiological characterization of microbial fuel cells equipped with SPEEK and Nafion membrane electrode assemblies
Journal of Bioscience and Bioengineering 122/3 322- 328 (2016) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]Kei Suzuki,Rubaba Owen,Joann Mork,Hiroki Mochihara,Takuya Hosokawa [Notes] 全文を担当
[124]. Comparison of electrochemical and microbiological characterization of microbial fuel cells equipped with SPEEK and Nafion membrane electrode assemblies
Journal of Bioscience and Bioengineering 122/3 322-328 (2016) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, 二又 裕之, 共著者]Kei Suzuki, Rubaba Owen, Joann Mork, Hiroki Mochihara, Takuya Hosokawa
[125]. Comparison of electrochemical and microbiological characterization of microbial fuel cells equipped with SPEEK and Nafion membrane electrode assemblies
Journal of Bioscience and Bioengineering 122/3 322-328 (2016) [Refereed] refereed
[Lead author or co-author]
[Author] 責任著者, 二又 裕之, 共著者]Kei Suzuki, Rubaba Owen, Joann Mork, Hiroki Mochihara, Takuya Hosokawa
[126]. 細菌由来メンブランヴェシクル研究、基礎と応用 膜小胞を介した選択的情報伝達
日本細菌学雑誌 71/1 35-35 (2016) [Refereed] non-refereed
[Lead author or co-author]
[Author] 田代 陽介, 長谷川 雄将, 新谷 政己, 大熊 盛也, 金原 和秀, 二又 裕之
[127]. 細菌由来メンブランヴェシクル研究、基礎と応用 膜小胞を介した選択的情報伝達
日本細菌学雑誌 71/1 35-35 (2016) [Refereed] non-refereed
[Lead author or co-author]
[Author] 田代 陽介, 長谷川 雄将, 新谷 政己, 大熊 盛也, 金原 和秀, 二又 裕之
[128]. Draft genome sequence of Pseudomonas sp. LAB-08 isolated from trichloroethene-contaminated aquifer soil
Genome Announcements 4/5 e00948-16 (2016) [Refereed] refereed
[Lead author or co-author]
[Author] Kenshi Suzuki, Fatma A.A. Aziz, Yuma Inuzuka, Yosuke Tashiro, Hiroyuki Futamata
[129]. Editorial: Development of microbial ecological theory: Stability, plasticity, and evolution of microbial ecosystems
Frontiers in Microbiology 7/(num) (xxx)-(zzz) (2016) [Refereed] refereed
[Lead author or co-author]
[Author] Shin Haruta, Yasuhisa Saito, Hiroyuki Futamata
[130]. Draft genome sequence of Pseudomonas sp. LAB-08 isolated from trichloroethene-contaminated aquifer soil
Genome Announcements 4/5 e00948-16 (2016) [Refereed] refereed
[Lead author or co-author]
[Author] Kenshi Suzuki, Fatma A.A. Aziz, Yuma Inuzuka, Yosuke Tashiro, Hiroyuki Futamata
[131]. Editorial: Development of microbial ecological theory: Stability, plasticity, and evolution of microbial ecosystems
Frontiers in Microbiology 7/(num) (xxx)-(zzz) (2016) [Refereed] refereed
[Lead author or co-author]
[Author] Shin Haruta, Yasuhisa Saito, Hiroyuki Futamata
[132]. P8-1-26 生ゴミ供給型微生物燃料電池における安定的電気生産を可能とする微生物生態系の特徴（ポスター，8-1 環境保全，2016年度佐賀大会）
日本土壌肥料学会講演要旨集 62/ 164-164 (2016) [Refereed] non-refereed
[Lead author or co-author]
[Author] 鈴木 渓, 由井 嵐士, 田代 陽介, 二又 裕之
[133]. 3-1-10 富栄養化汽水性佐鳴湖底泥表層における新規脱窒プロセス（3-1 土壌生物の生態と機能，2016年度佐賀大会）
日本土壌肥料学会講演要旨集 62/ 27-27 (2016) [Refereed] non-refereed
[Lead author or co-author]
[Author] 杉山 和哉, 工藤 勇人, 田代 陽介, 二又 裕之
[134]. Interspecies interactions are an integral determinant of microbial community dynamics
FRONTIERS IN MICROBIOLOGY 6/(num) 01148-1148 (2015) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma A. A. Aziz, Kenshi Suzuki, Akihiro Ohtaki, Keita Sagegami, Hidetaka Hirai, Jun Seno, Naoko Mizuno, Yuma Inuzuka, Yasuhisa Saito, Yosuke Tashiro, Akira Hiraishi, Hiroyuki Futamata
[135]. Interspecies interactions are an integral determinant of microbial community dynamics
FRONTIERS IN MICROBIOLOGY 6/(num) 01148-1148 (2015) [Refereed] refereed
[Lead author or co-author]
[Author] Fatma A. A. Aziz, Kenshi Suzuki, Akihiro Ohtaki, Keita Sagegami, Hidetaka Hirai, Jun Seno, Naoko Mizuno, Yuma Inuzuka, Yasuhisa Saito, Yosuke Tashiro, Akira Hiraishi, Hiroyuki Futamata
[136]. Interspecies interactions are an integral determinant of microbial community dyanamics
Frontiers in Microbiology (vol)/(num) 01148- (2015) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之,Fatma Azwani Abdul Aziz [共著者]Kenshi Suzuki$Akihiro Ohtaki$Keita Sagegami$Hidetaka Hirai$Jun Seno$Naoko Mizuno$Yuma Inuzuka$Yasuhisa Saito$Yosuke Tashiro$Akira Hiraishi [Notes] ほぼ全般
[137]. Complexities of cell-to-cell communication through membrane vesicles.
Frontiers in Microbiology 6/ 633- (zzz) (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yusuke Hasegawa [共著者]Hiroyuki Futamata, Yosuke Tashiro [Notes] Introduction および Discussionの一部
[138]. Complexities of cell-to-cell communication through membrane vesicles: implications for selective interaction of membrane vesicles with microbial cells.
Frontiers in Microbiology 6/633 1-5 (2015) [Refereed] refereed
[Lead author or co-author]
[Author] Yusuke Hasegawa, Hiroyuki Futamata, Yosuke Tashiro
[139]. Complexities of cell-to-cell communication through membrane vesicles: implications for selective interaction of membrane vesicles with microbial cells.
Frontiers in Microbiology 6/633 1-5 (2015) [Refereed] refereed
[Lead author or co-author]
[Author] Yusuke Hasegawa, Hiroyuki Futamata, Yosuke Tashiro
[140].
(vol)/(num) (xxx) - (zzz) (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]岸本 亮太、鈴木健司、田代 陽介 [Notes] 全文を担当
[141].
(vol)/(num) (xxx) - (zzz) (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]杉山和哉、工藤勇人、倉橋正典、杉浦佳樹、田代陽介 [Notes] 全文を担当
[142]. Inhibition of Pseudomonas aeroginosa swarming motility through 1-naphtol and other bicyclic compounds bearing hydroxyl groups.
Applied Environmental Microbiology 81/8 2808 - 2818 (2015) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Yosuke Tashiro [共著者]Hiromu Oura,Masanori Toyofuku,Kousetsu Ueda,Tatsunori Kiyokawa,Yurika Takahashi,Seunguk Lee,Hideaki Nojiri,Toshiaki Nakajima-Kambe,Hiroo Uchiyama,Hiroyuki Futamata,Nobuhiko Nomura [Notes] Disucssion部分
[143]. Electricity producing property and bacterial community structure in microbial fuel cell equipped with membrane electrode assembly
93/2 78-78 (2015) [Refereed] non-refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]Rubaba Owen,荒木葉子,山本脩二,鈴木渓,坂本尚敏,松田厚範 [Notes] 全文を担当（研究内容も指導）
[144]. Different communities dynamics are capable of generating sustainable electricity from microbial fuel cell with organic wastes
Microbes and Environments 29/2 145-153 (2014) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之 [共著者]Shuji Yamamoto,Kei Suzuki,Yoko Araki,Hiroki Mochihara,Tetsuya Hosokawa [Notes] 全体（論文の構成、執筆、図表作成、reviewerとの対応）を対応。
[URL]
[145].
26/1 18-20 (2014) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] 二又 裕之 [Notes] 全文を担当
[146]. Performance comparison of microbial fuel cells equipped with different membrane electrode assemblies.
Journal of Physics Conference Series/433 (2013)-012022 (2013) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Rubaba Owen [共著者]Yoko Araki,Shuji Yamamoto,Kei Suzuki,Hisatoshi Sakamoto,Atsunori Matsuda [Notes] 全文を担当
[147]. Challenge for complex microbial ecosystems: combination of experimental approaches with mathematical modeling.
Microbes and Environments 28/3 285-294 (2013) [Refereed] non-refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Hiroyuki Futamata [共著者]Shin Haruta,Takehito Yoshida,Yoshiteru Aoi,Kunihiko Kaneko [Notes] "Trends in understanding the dynamics of micobial ecosystem"の執筆、全体の構成、reviewerとのやり取り、を担当。
[148]. Electricity producing property and bacterial community structure in microbial fuel cells equipped with membrane electrode assembly.
Journal of Bioscience and Bioengineering 116/1 106-113 (2013) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]Hiroyuki Futamata [共著者]Owen Rubaba,Yoko Araki,Shuji Yamamoto,Kei Suzuki,Hisatoshi Sakamoto [Notes] 全文を担当。
[149]. Adaptation of soil microbes during establishment of microbial fuel cell consortia with lactate.
Journal of Bioscience and Bioengineering 115/1 58-63 (2013) [Refereed] refereed [Internationally co-authored papers] internationally co-authored paper
[Lead author or co-author] author
[Author] [責任著者]二又 裕之,Futamata [共著者]H. O. Bretschger,Andrea C. M. Cheung,J Kan,R. Owen,K. H. Nealson. [Notes] 全文を担当
[150]. Complete genomic structure of Bradyrhizobium sp. S23321: Insights into symbiosis evolution in soil oligotrophs.
Microbes and Envrionments 27/3 306-315 (2012) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]1. Okubo T. [共著者]T. Tsukui,S. Okamoto,K,Oshima,T. Fujisawa,A. Saito,H. Futamata,S. Yamamoto,K. Minamisawa他40名 [Notes] 結果とDiscussionの一部を担当。
[151]. Isolation and functional gene analysis of aromatic-hydrocarbon-degrading bacteria from a polychlorinated-dioxin-dechlorinating process.
Microbes and Environments 27/ 127-135 (2011) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Shinichi Kaiya [共著者]Sachi Utsunomiya,S. Suzuki,N. Yoshida,H. Futamata,T. Yamada [Notes] 結果とDiscussionの一部を担当。
[152]. Isolation and functional gene analysis of aromatic-hydrocarbon-degrading bacteria from a polychlorinated-dioxin-dechlorinating process.
Microbes and Environments Epub/Epub Epub- (2011) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]2. Kaiya [共著者]S.,S. Utsunomiya,S. Suzuki,N. Yoshida,H. Futamata,T. Yamada,A. Hiraishi. [Notes] 結果とDiscussionの一部を担当。
[153].
26/1 31 (2011)
[Lead author or co-author] co-author
[Author] [責任著者]春田伸 [共著者]二又裕之 [Notes] ／共著担当箇所（p31）
[154]. Removal of polychlorinated dioxins by semi-aerobic fed-batch composting with biostimulation of "Dehalococcoides".
J. Biosci. Bioeng. 109/3 249-256 (2010) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Akira Hiraishi [共著者]Takeshi Narihiro,Shinichi Kaiy,Hiroyuki Futamata [Notes] 結果、Discussion部分を担当
[155]. Removal of polychlorinated dioxins by semi-aerobic fed-batch composting with biostimulation of “Dehalococcoides".
J. Bioscience and Biotechnology 109/3 249-256 (2010) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Narihiro [共著者]T. S. Kaiya,H. Futamata,A. Hiraishi [Notes] 結果とDiscussionの一部を担当
[156]. Relationship between reductive- dehalogenase-homologous genes transcriptional level and dechlorinating activity in “Dehalococcoides"-containing tetrachloroethene-dechlorinating enrichment culture TUT2264.
Microbes and Environments 24/4 330-337 (2009) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] [責任著者]Futamata [共著者]H.,S. Kaiya,M. Sugawara,A. Hiraishi. [Notes] 全文を担当。
[157]. Molecular detection, isolation, and physiological characterization of functionally dominat phenol-degrading bacteria in activated sludge
Applied and Environmental Microbiology 64/ 4396-4402 (1998) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Watanabe, K., M. Teramoto, H. Futamata, and S. Harayama [Notes] 結果の一部を担当。
[158]. Comparison of root colonization by LR- and HR-isolates of fluorescent pseudomonads in soil with high salinity
Soil Sci. Plant Nutr 44/ 129-133 (1998) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Sakai, M., H. Ozawa, H. Futamata, J. S. Kim, and T. Matsuguchi [Notes] 結果の一部を担当。
[159]. Chemotactic response to amino acids of fluorescent pseudomonads isolated from spinach roots grown in soils with different salinity levels
Soil Sci. Plant Nutr 44/ 1-7 (1998) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] author
[Author] Futamata, H., M. Sakai, H. Ozawa, Y. Urashima, T. Sueguchi, and T. Matsuguchi [Notes] 全体に渡り担当。
[160]. Use of bacterial bioluminescence for monitoring the behavior of rhizobacteria introduced to plant rhizosphere
Soil Sci. Plant Nutr 43/ 395-404 (1997) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Sakai, M., H. Futamata, H. Ozawa, T. Sueguchi, J. S. Kim, and T. Matsuguchi [Notes] 実験方法と結果の一部
[161]. Effect of calcium ion on spinach root colonization of fluorescent pseudomonads through chemotaxis
Soil Sci. Plant Nutr. 42/ 323-331 (1996) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Sakai, M., H. Ozawa, H. Futamata, and T. Matsuguchi [Notes] 実験方法、結果
[162]. Effect of cations on the growth of fluorescent pseudomonad isolates from spinach roots grown in soils with different salinity levels
Soil Sci. Plant Nutr 41/ 605-611 (1995) [Refereed] refereed [Internationally co-authored papers] non-internationally co-authored paper
[Lead author or co-author] co-author
[Author] Sakai, M., H. Futamata, Y. Urashima, and T. Matsuguchi [Notes] 実験方法、結果を主として担当。
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